Details from NCBI annotation

Gene Symbol Smox
Gene Name spermine oxidase, transcript variant X6
Entrez Gene ID 101707899

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMOX ENSCPOG00000024093 (Guinea pig)

Gene Details

spermine oxidase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015071, Guinea pig)

Protein Percentage 96.22%
CDS Percentage 92.85%
Ka/Ks Ratio 0.05829 (Ka = 0.0187, Ks = 0.3208)

SMOX ENSG00000088826 (Human)

Gene Details

spermine oxidase

External Links

Gene Match (Ensembl Protein ID: ENSP00000307252, Human)

Protein Percentage 94.23%
CDS Percentage 90.51%
Ka/Ks Ratio 0.06439 (Ka = 0.029, Ks = 0.4496)

Smox ENSMUSG00000027333 (Mouse)

Gene Details

spermine oxidase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000105815, Mouse)

Protein Percentage 93.33%
CDS Percentage 89.07%
Ka/Ks Ratio 0.06211 (Ka = 0.0335, Ks = 0.5397)

Smox ENSRNOG00000021255 (Rat)

Gene Details

spermine oxidase (Smox), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028876, Rat)

Protein Percentage 94.05%
CDS Percentage 89.61%
Ka/Ks Ratio 0.06055 (Ka = 0.0304, Ks = 0.5021)

Genome Location

Sequence Coding sequence

Length: 1668 bp    Location: 5215998..5250731   Strand: +
>XM_004840765.1
ATGCAAAGTTGTGAATCCAGTGGCGAAAGTGCGGATGACCCTCTCAGTTGTGGCCTGCGGAGAAGGGGACAGCCTCGAGTTGTGGTGATTGGTGCTGGCTTGGCTGGCCTGGCTGCAACCAAAGCGCTTCTGGAGCAGGGCTTCACAGATGTCACTGTCCTCGAGGCTTCTAGCCGCATCGGAGGCCGCGTGCAAAGCGTGAAACTCGGACACGCCACCTTTGAGCTGGGAGCCACCTGGATCCATGGCTCCCATGGGAATCCTGTCTATCATCTAGCAGAAGCCAACGGCCTCTTGGAAGAGACAACCGATGGTGAGCGCAGCGTGGGCCGCATCAGCCTCTACTCCAAGAATGGCGTGGCCTGCTACCTTACCAACCGCAGCCGCAGGATCCCCAAGGATGTGGTTGAGGAATTCAGCGATTTATACAACGAGGTCTATAACTTGACCCAGGAGTTCTTCCGGCATGGTAAACCAGTCAATGCGGAGAGTCAGAACAGCGTTGGGGTGTTCACCCGGGAGGAGGTGCGCAACCGCGTCAGGGATGAGCCTGATGACCCGGAGACCACCAAGCGCCTGAAACTTGCCATGATGCAGCAGTACCTGAAGGTAGAAAGCTGTGAGAGCAGCTCACACAGCATAGACGAAGTATCCCTGAGCGCCTTCGGGGAGTGGACCGAGATCCCTGGTGCCCACCACGTCATCCCCTCAGGCTTCATGCGGGTCGTGGAGCTGCTGGCTGAGGGCATCCCGGCCCATGTAATCCAGCTGGGGAAACCTGTCCGGTGTATTCACTGGGACCAGGCCTCTGCCCGCCCCCGGGGTCCTGAGATCCAGCCTCGGGACAAGGGTGACCACAATCACGACACAGGGGAGGACAACCAGAGTGGAGAGAGTTCCCAGGGGCATGGATGGGATGAGGATGAGCAGTGGCCGGTGGTGGTGGAGTGCGAAGACTGCGAGGTGATCCCAGCAGACCACGTGATTGTGACCGTGTCCCTGGGTGTGCTCAAGAGGCAGTACACCAGCTTCTTCCAGCCGGGCCTGCCCACAGAAAAGGTGGCTGCCATCCACCGCCTGGGCATTGGCACCACTGACAAGATCTTCCTTGAATTTGAGGAGCCCTTCTGGGGTCCTGAGTGCAACAGCCTGCAGTTTGTGTGGGAGGATGAGGCTGAGAGCCACACCCTCACCTACCCACCTGAGCAGTGGTACCGCAAAATCTGTGGCTTCGACGTCCTCTACCCCCCTGAGCGCTATGGCCATGTGCTGAGTGGCTGGATCTGTGGGGAGGAGGCCCTTGTCATGGAGAGGTGTGATGACGAGGCAGTGGCCGAGATCTGCACAGAGATGTTGCGTCAGTTCACAGGGAACCCCAACATTCCAAAACCTCGGCGAATCCTGCGCTCGGCCTGGGGTAGCAACCCTTACTTCCGAGGCTCCTACTCATACACGCAGGTGGGCTCAAGTGGGGCAGACGTGGAGAAGCTGGCCAAGCCGCTGCCCTACACAGAGAGCTCCAAGACCGCGCCCATGCAGGTGCTGTTCTCGGGGGAGGCCACCCACCGCAAGTACTACTCCACTACTCACGGTGCTCTGCTGTCCGGCCAGCGCGAGGCTGCTCGTCTCATCGAGATGTATCGAGACCTCTTCCAGCAGGGTCCCTGA

Related Sequences

XP_004840822.1 Protein

Smox PREDICTED: spermine oxidase isoform X6 [Heterocephalus glaber]

Length: 555 aa      View alignments
>XP_004840822.1
MQSCESSGESADDPLSCGLRRRGQPRVVVIGAGLAGLAATKALLEQGFTDVTVLEASSRIGGRVQSVKLGHATFELGATWIHGSHGNPVYHLAEANGLLEETTDGERSVGRISLYSKNGVACYLTNRSRRIPKDVVEEFSDLYNEVYNLTQEFFRHGKPVNAESQNSVGVFTREEVRNRVRDEPDDPETTKRLKLAMMQQYLKVESCESSSHSIDEVSLSAFGEWTEIPGAHHVIPSGFMRVVELLAEGIPAHVIQLGKPVRCIHWDQASARPRGPEIQPRDKGDHNHDTGEDNQSGESSQGHGWDEDEQWPVVVECEDCEVIPADHVIVTVSLGVLKRQYTSFFQPGLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSLQFVWEDEAESHTLTYPPEQWYRKICGFDVLYPPERYGHVLSGWICGEEALVMERCDDEAVAEICTEMLRQFTGNPNIPKPRRILRSAWGSNPYFRGSYSYTQVGSSGADVEKLAKPLPYTESSKTAPMQVLFSGEATHRKYYSTTHGALLSGQREAARLIEMYRDLFQQGP