Details from NCBI annotation

Gene Symbol Rbck1
Gene Name RanBP-type and C3HC4-type zinc finger containing 1, transcript variant X5
Entrez Gene ID 101721667

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RBCK1 ENSCPOG00000005720 (Guinea pig)

Gene Details

RanBP-type and C3HC4-type zinc finger containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005158, Guinea pig)

Protein Percentage 95.1%
CDS Percentage 92.22%
Ka/Ks Ratio 0.05948 (Ka = 0.0225, Ks = 0.3779)

RBCK1 ENSG00000125826 (Human)

Gene Details

RanBP-type and C3HC4-type zinc finger containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000348632, Human)

Protein Percentage 89.61%
CDS Percentage 88.95%
Ka/Ks Ratio 0.0789 (Ka = 0.0465, Ks = 0.5894)

Rbck1 ENSMUSG00000027466 (Mouse)

Gene Details

RanBP-type and C3HC4-type zinc finger containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000105473, Mouse)

Protein Percentage 88.58%
CDS Percentage 85.56%
Ka/Ks Ratio 0.06697 (Ka = 0.0558, Ks = 0.8339)

Rbck1 ENSRNOG00000006695 (Rat)

Gene Details

ranBP-type and C3HC4-type zinc finger-containing protein 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000047637, Rat)

Protein Percentage 80.74%
CDS Percentage 78.89%
Ka/Ks Ratio 0.1006 (Ka = 0.111, Ks = 1.1039)

Genome Location

Sequence Coding sequence

Length: 1533 bp    Location: 1503041..1523542   Strand: +
>XM_004840626.1
ATGGACGAGACGACCAAGAAAGCAGAGGAGATGGCCCTGAGCCTCGCCCGGGCGGTGGTGGGCGGGGATGAGCAGGCAGCTGTGAAGTATGCCACCTGGCTGGCACAGCAGCGGGCATCCCTGAGTGTGCATCTGAAGCCAGAGGTCCCACGGACACGGGACATCAGGCTGTGTGTGAGTGTGGAGGATGCCCATGTACAGACCGTCACCATCTGGCTCATGGTGCGCCCTGACATGACAGTGGCTTCCCTCAAGGACATGGTATTCCTGGACTATGGCTTCCCCCCGAGGCTGCAGCAGTGGGTGATTGGGCAGCGGCTGGCCCGAGACCAGGAGACACTGCACTCCCATGGGGTGCGGCGGAATGGGGACAGCGCCTACCTGTATCTGCTGTCAGCCCGAAACACCTCACTCAACCCACGGGAGGTTCAGCGCCAGCGCCAGCTTCGGATGCTGGAGGATCTGGGCTTCAAGGACCTCACACTCCAGCCACGGGGTCCCCTGGAGCCAGCTCCTTCCAACCCTGGGGTACCCCAGGAACTTGGAGGGGTACAACCCAATGGAGTGCCTGAGCCTCCACCGGTGGGCTGGCAGTGCCCTGGGTGCACCTTCATCAACAAACCTACCCGGCCTGGCTGCGAGATGTGCTGCTGTTCACGGCCGGAGGCCTACCAGGTGCCTGCCTCATACCAGCCCGATGAGGAGGAGCGGGCACGTCTGGCCGGCGAACAGGAGGCGCTACGTCAGTACCAGCAGCGGAAGCAGCAGCAGCAAGAGGGGAACTACCTGCAGCACGTGAAGCTGGAGCAGAGGAGCCTGGTGCTGAATACGGAGCCCGCCGAGTGCCCCGTGTGCTACTCGGTGCTGGCACCTGGTGAGGCGGTGGTGCTGCGGGAGTGTCTGCACACCTTCTGCAGGGAATGCCTCCAGGGCACCATCCGCAACAGCCAGGAGGCGGAGGTCTCCTGTCCCTTCATTGATGACACCTACTCGTGCCCGGGGAAGCTGCTGGAGAGGGAGATCCGGGCGCTCCTGCCCCCCGAGGATTACCAGCGCTTTCTGGACCTGAGCGTCTCCATTGCAGAAAACCGCAGTGCTTTCAGCTACCACTGCAAGACCCCGGACTGCAAGGGCTGGTGCTTTTTTGAGGATGACGTCAATGAGTTCACCTGTCCCGTGTGTTTCCACATCAACTGCTTGCTTTGCAAGGCCATCCACGAGCACATTAACTGCAAGGAGTATCAGGATGACCTGGCACTGCGGGCTCAGAATGACCTGGCTGCCCGGCAGACCACAGAGATGCTGCAGGTGATGCTGCAGCAGGGTGAGGCCATGCACTGCCCACGGTGCCGGATCGTGGTACAGAAGAAGGACGGCTGTGACTGGATCCGCTGCACTGTCTGCCACACTGAGATCTGCTGGGTCACCAAGGGCCCACGCTGGGGCCCCAGGGGCCCAGGGGACACCAGTGGGGGCTGCCGCTGCCGAGTGAATGGGATTCCTTGCCACCCAAGCTGTCAGAACTGCCACTAA

Related Sequences

XP_004840683.1 Protein

Rbck1 PREDICTED: ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X5 [Heterocephalus glaber]

Length: 510 aa      View alignments
>XP_004840683.1
MDETTKKAEEMALSLARAVVGGDEQAAVKYATWLAQQRASLSVHLKPEVPRTRDIRLCVSVEDAHVQTVTIWLMVRPDMTVASLKDMVFLDYGFPPRLQQWVIGQRLARDQETLHSHGVRRNGDSAYLYLLSARNTSLNPREVQRQRQLRMLEDLGFKDLTLQPRGPLEPAPSNPGVPQELGGVQPNGVPEPPPVGWQCPGCTFINKPTRPGCEMCCCSRPEAYQVPASYQPDEEERARLAGEQEALRQYQQRKQQQQEGNYLQHVKLEQRSLVLNTEPAECPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVSCPFIDDTYSCPGKLLEREIRALLPPEDYQRFLDLSVSIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHINCLLCKAIHEHINCKEYQDDLALRAQNDLAARQTTEMLQVMLQQGEAMHCPRCRIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPRGPGDTSGGCRCRVNGIPCHPSCQNCH