Details from NCBI annotation

Gene Symbol Lysmd2
Gene Name LysM, putative peptidoglycan-binding, domain containing 2
Entrez Gene ID 101703634

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LYSMD2 ENSCPOG00000014098 (Guinea pig)

Gene Details

LysM, putative peptidoglycan-binding, domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012700, Guinea pig)

Protein Percentage 79.34%
CDS Percentage 85.4%
Ka/Ks Ratio 0.41048 (Ka = 0.1228, Ks = 0.2993)

LYSMD2 ENSG00000140280 (Human)

Gene Details

LysM, putative peptidoglycan-binding, domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000267838, Human)

Protein Percentage 75.81%
CDS Percentage 80.65%
Ka/Ks Ratio 0.27515 (Ka = 0.1457, Ks = 0.5294)

Lysmd2 ENSMUSG00000032184 (Mouse)

Gene Details

LysM, putative peptidoglycan-binding, domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034702, Mouse)

Protein Percentage 76.61%
CDS Percentage 77.42%
Ka/Ks Ratio 0.15881 (Ka = 0.1411, Ks = 0.8882)

Lysmd2 ENSRNOG00000010642 (Rat)

Gene Details

LysM, putative peptidoglycan-binding, domain containing 2 (Lysmd2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014301, Rat)

Protein Percentage 75.81%
CDS Percentage 77.96%
Ka/Ks Ratio 0.18535 (Ka = 0.1463, Ks = 0.7892)

Genome Location

Sequence Coding sequence

Length: 375 bp    Location: 8642304..8644510   Strand: +
>XM_004835403.1
ATGGAACAGATTAAAAGGGCCAATAAACTGTTCACCAACGACTGTATCTTTCTGAAGAAAACCTTGAGCATCCCAGTTAGATCAGAGCAGCCTTTGGTGTTCAATGGACTGAGCTCCTCGGATTCTCCAGAAAGTGAAGCTGGTGACAGCAGCTTTCCTCCTTCAGAGGAGCTGGGGGTAGCGGGGGATGAGCTTCTGCCTCCCAGTCCCCAGGGACCAGCCCCTCGGCCTGTGCAGCCCAAGGAGGTGTCAGCCAGAGACTTCCTGGACAGAGTGGACCTGCAGATCAAACTGTCCACGCAGGCAGCCCAGCGGCTGAAGCAGGAGAGCAGAGATGAACAAAGTCCCTATGCGACCTCCCTTTATCACAGTTAG

Related Sequences

XP_004835460.1 Protein

Lysmd2 PREDICTED: lysM and putative peptidoglycan-binding domain-containing protein 2 [Heterocephalus glaber]

Length: 124 aa      View alignments
>XP_004835460.1
MEQIKRANKLFTNDCIFLKKTLSIPVRSEQPLVFNGLSSSDSPESEAGDSSFPPSEELGVAGDELLPPSPQGPAPRPVQPKEVSARDFLDRVDLQIKLSTQAAQRLKQESRDEQSPYATSLYHS