Details from NCBI annotation

Gene Symbol Xirp1
Gene Name xin actin-binding repeat containing 1, transcript variant X4
Entrez Gene ID 101706778

Database interlinks

Part of NW_004624731.1 (Scaffold)

For more information consult the page for NW_004624731.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

XIRP1 ENSCPOG00000019458 (Guinea pig)

Gene Details

xin actin-binding repeat containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020129, Guinea pig)

Protein Percentage 85.08%
CDS Percentage 88.28%
Ka/Ks Ratio 0.29093 (Ka = 0.082, Ks = 0.2818)

XIRP1 ENSG00000168334 (Human)

Gene Details

xin actin-binding repeat containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000343140, Human)

Protein Percentage 82.32%
CDS Percentage 84.38%
Ka/Ks Ratio 0.20966 (Ka = 0.0998, Ks = 0.4762)

Xirp1 ENSMUSG00000079243 (Mouse)

Gene Details

xin actin-binding repeat containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000107262, Mouse)

Protein Percentage 76.8%
CDS Percentage 79.61%
Ka/Ks Ratio 0.22289 (Ka = 0.1459, Ks = 0.6547)

Xirp1 ENSRNOG00000037085 (Rat)

Gene Details

xin actin-binding repeat containing 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000052739, Rat)

Protein Percentage 75.85%
CDS Percentage 78.02%
Ka/Ks Ratio 0.21711 (Ka = 0.1601, Ks = 0.7373)

Genome Location

Sequence Coding sequence

Length: 3384 bp    Location: 1779060..1785983   Strand: +
>XM_004835232.1
ATGGCCGAAACCCAGGCGCAGGCGACCCCCAAGCCAACCGTCCCAATGGCAACTGCAGAGGGCCTGTCGCTGCCTCCACCCTCGACCCTGGGACACCTGCCACCACCACCACCCAAGGAATCCTTCTCCAAGTTCCACCAGCAGCGGCAAGCTAGCGAGCTCCGCCGCCTCTACAAGCACATCCACCCGGAGCTCCGAAAGAACCTGGCCGAGGCTGTGGCCGAGGATCTGGCTGAGGTCCTGGGCTCCGAGGAGCCCACAGAGGGTGACGTCCAGTGCATGCGCTGGATCTTTGAGAACTGGCAGCTGGACGCCATTGGTGACCGTGAGCAGCCAGCTGCCAAGGAACCCGTGCCAGGCGGCGATGTCCAGGCCACCTCCCGCAAGTTTGAGGAAGGCTCCTTTGCCAACAGCGTAGACCCCCAGCCACCAGGACCCCAGCCATCTGGAGGTGACGTTCGTGCTGCCCGCTGGCTGTTTGAGACAAAGCCGCTGGATGAGCTGACAGGCCAGGCAGAGGCGACAGAGGCCCCGGGGAGGGAGCCTGTAGCCAGTGGAGATGTGCAAGGGACCAGGATGCTCTTTGAGACTCGACCACTGGACCGCCTGGGCTCCCGCCCCTCCATGCAAGAGCAGAGCCCGCTGGAGCTGCGCTCAGAGATCCAGGAGCTGAAAGGTGATGTGAAGAAGACGGTGAAGCTGTTTCAAACCGAGCCACTGTGCGCCATCCAGGACGCCGAGGGCGCCATCCATGAGGTCAAGGCGGCCTGCAGGGAAGAGATCCAAAGCAACGCGGTAAGGTCCGCCCGCTGGCTCTTTGAGACCCGCCCACTGGACGAGTTCAATCAGGACCCTAGTCAGGTGCGGGTGATTCGCGGGATCTCCTTGGAAGAGGGGTCCCGGCCGGACGTCAGCGCTACGCGTTGGATCTTTGAGACGCAGCCCCTGGACGCCATCAGGGAGATCCTGGTGGACGAGAAGGACTTCCAGCCATCCCCAGATCTCGTCCCTCCAGGACCAGATGTTCAACAGCAGCGGCATCTGTTTGAGACTCGCGCTCTGGACACTTTGAAGGGGGAGGAGGAGGCTGCAGCTGAGGCCCCGCCCAAGGAGGAGGTGGTCCCTGGCAATGTCCGCTCCACCCTGTGGCTGTTTGAAACCAAACCCCTGGACACTCTCGGAGACCAAGTCCAAGTGGGTCACTTGCAGCGGGTGGGCCACCAGGAAGATGAAGGGCTCATGTGTGCTGGCTCATCACCACTTCCTGCCTTTCTGGGTGCCCCGCAGAGGGATGGGGTGAAGGGGGACGTGAAAAACTTCAAGAACCTTTTTGAGACCCTTCCCCTGGACAGTATCAGGCAGGGGGAGGCTTCAGTCCCTGGGAGTGTGAACCCAGCAGGAACCACTGATTTTGCTGGGCAGTCCCAGGCAGCAGGCTCCCCGGTGTACGCCGTGCAGGACAGCGAGGGCCAGCTCCATGCCCTGACCTCGGTCAGCAGAGAGCAGGTAGTGGGAGGTGATGTGCAGGGCTACAGGTGGATGTTTGAGACTCAGCCCCTAGACCAGCTGGGTCGAAGCCCCAGTACCATCGATGTGGTACGGGGCATCACTCGGCAGGAAGTGATGGCTGGAGACGTAGGGACAGCTCGGTGGCTCTTTGAGACCCAGCCCCTGGAGGTGATCCACCAGCGGGAGCAGCAGGAACGACGAGAAGAGGAGGGAAAGACTCAAGAAGGCCCCCAGCCCGAGGCACCCCCAAAAGGCGATGTACAGACCATCCGGTGGTTGTTTGAGACATGCCCAATGAGTGAGGTGGCAGAGAAGCAGTCCTCAGAAGTCACAGATCCCACAGCCAAGGCCCAGGCACGGTCCTCCACCTGGATGTTCAAGCCCCAGCCTCTTGACCCAGCAGAGGACTCCAGGGAGAAACACTTGCAGGTCAGCCAGGTGCAGGCTGGGGAAAGACAGACCAATGGGCATATCTTTGAGACTGAGCCTCTGCAGGCCTCCGGCCGTCCCTGTGGAAGAGGGCCTGTGCGATACTGCAGCCGGGTGGAGATCCCTTCAGGGCAGGTGTCTCGGCAGAAGGAGGTTTTCCAGGCCTTGGAGGCCAGTAAGAGGGAAGAGCAAGAGCAGGACTCCAGGACAGCCCCTGGGCCCATTGCCACCGGCTCTGTGCACAAGTTCACCTGGCTATTTGAGAACTGCCCCATGGGCTCCCTGACAGCTGAGAGCATCCAAGGGGGTGACCTGGAAGAAGAGCAGCCCAGGAAGCCCTCCAGCAATGGGACACCAGAGAAGCAGGAGACTGCAGCCGAGGGGACACTTCGGACTCTGCACGCCACACCTGGCATCCTCCACCACAGAGGCATCCTCATGGAGGTTCGAGGGCCAGGGGAGCTCTGCCTTGCCAAGTATGTGCTCCCAGGGCCAGGGCAGGGACGTCCCTATGTACAGAAGGAGGAGCTAGTGTCCGGTGAGCTGCCTAGGATTGTCCGCCAAGTGCTGCGCCGGCCAGACGTGGACCAGCGGGGCCTGCTGGTGCAGGAGGACCAAACTGGCCAGCTCTGGCTCCATGCACTGAGGCTGCCAGCTCCAGGCAACAGTGGGAATATTGAGGACATGGATCCTGAGCTCCAGCAGTTACTAGCTTGTGGCCTCGGGACCTCAGTGGCAAGGACTGGGCTGGTGATGCAGGAGACAGAACAGGGCCTAGTCTCCCTGACCGCCTACTCCCTACAGCCCCAGCTAACCAGCAGGGTCCCAGAAAGGAGCAGTGTGCAGCTGCTGGCCAGCTGCATAGACAAGGGAGACCTGAGTGGCCTGCATAGTCTGCGTTGGGAGCCACCAGCTGACCCAAGTCCAGGGCCAGCCACTGAGGGAACCCAGAGGCTTCTCCCAACTGAGAGCATCATCCATGTTCCCCCACTGGATACCAGCTTGGGGATGGGGCATCTGAGAGGCCCAGGGGCCACCTCCTGCCTCCCTCAGGCCATTGCAAAGGCAGTCCCTCTGGCTGGGCAGGCTGCACCCCCAGCCCCATTGCAGGATACAGAAAAGCAAGAGGACAGCAGTCACACTGGGCAGAAAAGGACGGCAGCCTTGGGAAGGTCAGAAGGCACCATGGCTACCCATGCAGAGTCCAGGGCCCCAGACCTCCAGGCAGCCTTGCAGAGTCTTCAGATGGCAACAGCTGAAGCCCAAAGCCTGCACCAGCAAGTTCTGAGCAGGCACAAGCAGGGCTCCACCCCTGCAGCCACAGCTGTGCCAGTCCAGGATGGCCTACCAGCACCAGCCCCTGCCACGGCAGCTACCCAGAGCAACAGCAGGCGTGTGGCTGCAGGTGACTCCAGGACCCCAGCAGCCCCCAGAAAGCTGCTGTGA

Related Sequences

XP_004835289.1 Protein

Xirp1 PREDICTED: xin actin-binding repeat-containing protein 1 isoform X4 [Heterocephalus glaber]

Length: 1127 aa      View alignments
>XP_004835289.1
MAETQAQATPKPTVPMATAEGLSLPPPSTLGHLPPPPPKESFSKFHQQRQASELRRLYKHIHPELRKNLAEAVAEDLAEVLGSEEPTEGDVQCMRWIFENWQLDAIGDREQPAAKEPVPGGDVQATSRKFEEGSFANSVDPQPPGPQPSGGDVRAARWLFETKPLDELTGQAEATEAPGREPVASGDVQGTRMLFETRPLDRLGSRPSMQEQSPLELRSEIQELKGDVKKTVKLFQTEPLCAIQDAEGAIHEVKAACREEIQSNAVRSARWLFETRPLDEFNQDPSQVRVIRGISLEEGSRPDVSATRWIFETQPLDAIREILVDEKDFQPSPDLVPPGPDVQQQRHLFETRALDTLKGEEEAAAEAPPKEEVVPGNVRSTLWLFETKPLDTLGDQVQVGHLQRVGHQEDEGLMCAGSSPLPAFLGAPQRDGVKGDVKNFKNLFETLPLDSIRQGEASVPGSVNPAGTTDFAGQSQAAGSPVYAVQDSEGQLHALTSVSREQVVGGDVQGYRWMFETQPLDQLGRSPSTIDVVRGITRQEVMAGDVGTARWLFETQPLEVIHQREQQERREEEGKTQEGPQPEAPPKGDVQTIRWLFETCPMSEVAEKQSSEVTDPTAKAQARSSTWMFKPQPLDPAEDSREKHLQVSQVQAGERQTNGHIFETEPLQASGRPCGRGPVRYCSRVEIPSGQVSRQKEVFQALEASKREEQEQDSRTAPGPIATGSVHKFTWLFENCPMGSLTAESIQGGDLEEEQPRKPSSNGTPEKQETAAEGTLRTLHATPGILHHRGILMEVRGPGELCLAKYVLPGPGQGRPYVQKEELVSGELPRIVRQVLRRPDVDQRGLLVQEDQTGQLWLHALRLPAPGNSGNIEDMDPELQQLLACGLGTSVARTGLVMQETEQGLVSLTAYSLQPQLTSRVPERSSVQLLASCIDKGDLSGLHSLRWEPPADPSPGPATEGTQRLLPTESIIHVPPLDTSLGMGHLRGPGATSCLPQAIAKAVPLAGQAAPPAPLQDTEKQEDSSHTGQKRTAALGRSEGTMATHAESRAPDLQAALQSLQMATAEAQSLHQQVLSRHKQGSTPAATAVPVQDGLPAPAPATAATQSNSRRVAAGDSRTPAAPRKLL