Details from NCBI annotation

Gene Symbol Lrch3
Gene Name leucine-rich repeats and calponin homology (CH) domain containing 3
Entrez Gene ID 101705568

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRCH3 ENSCPOG00000011465 (Guinea pig)

Gene Details

leucine-rich repeats and calponin homology (CH) domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010307, Guinea pig)

Protein Percentage 89.16%
CDS Percentage 89.44%
Ka/Ks Ratio 0.34597 (Ka = 0.0765, Ks = 0.2211)

LRCH3 ENSG00000186001 (Human)

Gene Details

leucine-rich repeats and calponin homology (CH) domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000334375, Human)

Protein Percentage 87.59%
CDS Percentage 87.49%
Ka/Ks Ratio 0.23121 (Ka = 0.0752, Ks = 0.3254)

Lrch3 ENSMUSG00000022801 (Mouse)

Gene Details

leucine-rich repeats and calponin homology (CH) domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023491, Mouse)

Protein Percentage 85.44%
CDS Percentage 84.35%
Ka/Ks Ratio 0.18609 (Ka = 0.0872, Ks = 0.4687)

Lrch3 ENSRNOG00000001774 (Rat)

Gene Details

Protein Lrch3

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000042417, Rat)

Protein Percentage 84.27%
CDS Percentage 83.36%
Ka/Ks Ratio 0.18319 (Ka = 0.0943, Ks = 0.5149)

Genome Location

Sequence Coding sequence

Length: 2295 bp    Location: 61011749..60901919   Strand: -
>XM_004835177.1
ATGAACCCCCAACAGCGCATGGCTGTGATAGGGACCAACAAGGAGCTGAGCGACCTGCTAGACTTCAGTGCGATGTTTTCTCCACCTGTTAATAGTGGGAAAGCCAGACCAACGACACTGGGAAGCAAGTATTCTGGCCCTGTGGTGTTGGCAGGGAGCCTCTCCGGTGTTAACGGCGGCTTGAACCCCGGGGCAGGCCCTGGTCCTAGCCCGGGCTCGTGGAGCCGCTCCCTCGACCGAGCCCTGGAGGAGGCGGCGGTAACCGGGGTGCTGAGCCTGAGTGGCCGGAAGCTGAGAGAGTTTCCCCGGGGAGCGGCCCACCACGACCTGACAGACACCACCCGGGCGGATTTATCACGAAATCGCCTCTCAGAAATTCCTATAGAAGCATGTCATTTTGTTTCCCTTGAAAATCTCAACTTATACCAAAATTGCATTCGGTATATTCCAGAAGCAATTCTAAACTTACAAGCACTAACATTCTTAAATATTAGTCGGAACCAACTGTCAACATTACCAGTACACTTGTGTAATTTACCATTGAAAGTCTTAATTGCTAGTAATAACAAATTGGTCTCACTTCCAGAAGAAATTGGACGCCTCAGACAGTTGACAGAACTTGATGTCAGCTGCAATGAAATTCAGACTATACCTTCTCAAATTGGTAATCTGGAGGCTTTGCGAGACCTTAATGTAAGAAGAAATCACTTAGTACGTTTGCCCGAAGAGCTTGCAGAGTTGCCTTTGATACGTTTAGACTTCTCCTGCAATAAAATTACATCAATCCCTGTTTGTTACCGGAACCTCAGACACCTGCAGGTGATCACCCTAGATAACAACCCACTGCAGTCACCTCCTGCACAGATATGTATAAAAGGCAAAATCCACATATTTAAATACCTGAACATGCAAGCTTGTAAGATTGCTCCAGACCTGCCGGATTATGATAGGAGACCCTTGGGCTTTGGCTCCTGCCATGAAGAACTGTACTCAGGTCGCCCTTATGGAGCCCTTGATTCAGGTTTCAATAGTGTGGACAGTGGAGATAAGAGGTGGTCAGGGAATGAGCCTACAGATGAATTTTCAGATTTGCCGCTTCGGGTAGCAGAAATTACTAAAGAACAAAGACTACGAAGAGAAAGCCAATACCAGGAGAATCGGAACAGTTTAGTTGTAACAAATGGTGGAGTGGAACACGACTTGGATCAGATTGACTACATTGACAGCTGTGCTGCAGAGGAAGAGGAAGATGAAGCAAGACAGCCCCGGGGCCTGGACTCTGACAGCCTCAGCTCACAGTTCATGGCGTACATCGAACAGCGGCGGGTCTCACACGAGTGTTCACCAGTAAAGCCAGCAGCCATTAGGGAGTTTCAAAAACCAGAAGACATGAGACGATATTCACATCAAAACAGGGTTCCAGTTGAGCCACCTTCTCTCTTGTCACTATCACCAAGCCACAATCAGCTTCCACACACAGACTTGGAAGTGCACCGGAGAAGAGAACAGTTGGTAGAACGTGCTCGGAGAGAAGCACAGCTGGCAGCCCTGCAATACGAGGAGGAGAAAATGAGGACCAAGCAGATTCAGAGAGAGGCTGTCCTGGACTTTGTCAAGCAAAAAGCATCACAAAATCCACAAAAACAACAATCCCCGATGGATAATGAGTGTCCCTTCCCACCCAGAAGGTCTCAGCACACTGATGATAGTGCCTTGTTAGTGTCGCTGTCAGGGTTGAATCAGGTGGACTGTGCTGCTACCCTGCCTCATTCTGCTGCCTTCATGCCTCTTAAGAGTGATGACAAACCTAATGCTACATCAAGTTCACCCACCGTGGAAACAGGTCATGCTTCCTCCCTTCACTCATCTCCTGCACCTGCCATGGATTCTACAGAATGCATCACAAGACAGAGAGAAGAAGAGCTGAAATTAATAGATCAGCTACGGAAACACATTGAGTACCGGTTAAAAGTCTCTCTGCCTTGTGATCTTGGAGCGGCTCTAACTGATGGTGTTGTTCTTTGCCATTTGGCCAATCATGTGCGGCCTCGATCTGTCCCAAGCATTCATGTTCCCTCACCAGCTGTGCCTAAATTAACAATGGCAAAATGCAGGCGAAATGTGGAGAATTTCCTAGAAGCATGCAGAAAAATTGGTGTACCTCAGGAGCAATTGTGCTTGCCTCTCCACATTTTAGAAGAGAAAGGTTTGGGCCAGGTTGCAGTGACGGTGCAGGCTCTCCTGGCACTCGCCCCGGCCAAGCAGCAGCAGCAGCAGCAGCTGTCTGCTGTGTAA

Related Sequences

XP_004835234.1 Protein

Lrch3 PREDICTED: leucine-rich repeat and calponin homology domain-containing protein 3 [Heterocephalus glaber]

Length: 764 aa      View alignments
>XP_004835234.1
MNPQQRMAVIGTNKELSDLLDFSAMFSPPVNSGKARPTTLGSKYSGPVVLAGSLSGVNGGLNPGAGPGPSPGSWSRSLDRALEEAAVTGVLSLSGRKLREFPRGAAHHDLTDTTRADLSRNRLSEIPIEACHFVSLENLNLYQNCIRYIPEAILNLQALTFLNISRNQLSTLPVHLCNLPLKVLIASNNKLVSLPEEIGRLRQLTELDVSCNEIQTIPSQIGNLEALRDLNVRRNHLVRLPEELAELPLIRLDFSCNKITSIPVCYRNLRHLQVITLDNNPLQSPPAQICIKGKIHIFKYLNMQACKIAPDLPDYDRRPLGFGSCHEELYSGRPYGALDSGFNSVDSGDKRWSGNEPTDEFSDLPLRVAEITKEQRLRRESQYQENRNSLVVTNGGVEHDLDQIDYIDSCAAEEEEDEARQPRGLDSDSLSSQFMAYIEQRRVSHECSPVKPAAIREFQKPEDMRRYSHQNRVPVEPPSLLSLSPSHNQLPHTDLEVHRRREQLVERARREAQLAALQYEEEKMRTKQIQREAVLDFVKQKASQNPQKQQSPMDNECPFPPRRSQHTDDSALLVSLSGLNQVDCAATLPHSAAFMPLKSDDKPNATSSSPTVETGHASSLHSSPAPAMDSTECITRQREEELKLIDQLRKHIEYRLKVSLPCDLGAALTDGVVLCHLANHVRPRSVPSIHVPSPAVPKLTMAKCRRNVENFLEACRKIGVPQEQLCLPLHILEEKGLGQVAVTVQALLALAPAKQQQQQQLSAV