Details from NCBI annotation

Gene Symbol Tmem42
Gene Name transmembrane protein 42, transcript variant X1
Entrez Gene ID 101704718

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM42 ENSCPOG00000005518 (Guinea pig)

Gene Details

transmembrane protein 42

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004971, Guinea pig)

Protein Percentage 89.94%
CDS Percentage 90.36%
Ka/Ks Ratio 0.15551 (Ka = 0.0587, Ks = 0.3778)

TMEM42 ENSG00000169964 (Human)

Gene Details

transmembrane protein 42

External Links

Gene Match (Ensembl Protein ID: ENSP00000306564, Human)

Protein Percentage 84.28%
CDS Percentage 82.81%
Ka/Ks Ratio 0.12852 (Ka = 0.0987, Ks = 0.7676)

Tmem42 ENSMUSG00000066233 (Mouse)

Gene Details

transmembrane protein 42

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000081784, Mouse)

Protein Percentage 79.62%
CDS Percentage 81.1%
Ka/Ks Ratio 0.17389 (Ka = 0.1304, Ks = 0.7502)

Tmem42 ENSRNOG00000032027 (Rat)

Gene Details

transmembrane protein 42 (Tmem42), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000043044, Rat)

Protein Percentage 77.71%
CDS Percentage 79.62%
Ka/Ks Ratio 0.1317 (Ka = 0.1345, Ks = 1.0213)

Genome Location

Sequence Coding sequence

Length: 480 bp    Location: 75625399..75622212   Strand: -
>XM_004835061.1
ATGGCGGCATGTCCGCTGCCTTTGGGCTGCGCCGTGACGGCCACCGCCTACCCCGACACGCCGGCCGCGGTCCCCCCGCGCCTCCAGGCCGGCGCGATGCGGCGCCGCTTCTGGGGCGTGTTCAACTGCCTGTGCGCTGGCGTGTTCGGGGCGCTGGCCGCCGCCGCCGCCAAGCTGGCCTTCGGCAGCGAGGTCCACGTCGGCTTGTGCATCACAAGCATCGTTGTGATGTTCTCTGCCAACTCTCTGATGTGGACCTTCTTTAGCCGGGGCCTCAGTTTCTCCATGTCGTCAGCCATTGCATCAGTCACAGTGACCTTTTCAAACATCCTGAGCTCGGCCTTGCTGGGCTACTTGCTGTACGGTGAGTGCCAGGAGGTGCTGTGGTGGGGAGGCGTGTTCCTCATCCTCTGTGGGCTCACTCTGGTCCAAAGGAAGCTGCCACCTGTCTGGAAGCCTGTCCCGCACAAGCAGCAGTGA

Related Sequences

XP_004835118.1 Protein

Tmem42 PREDICTED: transmembrane protein 42 isoform X1 [Heterocephalus glaber]

Length: 159 aa      View alignments
>XP_004835118.1
MAACPLPLGCAVTATAYPDTPAAVPPRLQAGAMRRRFWGVFNCLCAGVFGALAAAAAKLAFGSEVHVGLCITSIVVMFSANSLMWTFFSRGLSFSMSSAIASVTVTFSNILSSALLGYLLYGECQEVLWWGGVFLILCGLTLVQRKLPPVWKPVPHKQQ