Details from NCBI annotation

Gene Symbol Limd1
Gene Name LIM domains containing 1
Entrez Gene ID 101699485

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LIMD1 ENSCPOG00000001164 (Guinea pig)

Gene Details

LIM domains containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001049, Guinea pig)

Protein Percentage 82.36%
CDS Percentage 85.49%
Ka/Ks Ratio 0.18827 (Ka = 0.0944, Ks = 0.5012)

LIMD1 ENSG00000144791 (Human)

Gene Details

LIM domains containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000273317, Human)

Protein Percentage 78.03%
CDS Percentage 79.97%
Ka/Ks Ratio 0.15109 (Ka = 0.1259, Ks = 0.8331)

Limd1 ENSMUSG00000025239 (Mouse)

Gene Details

LIM domains containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026269, Mouse)

Protein Percentage 74.31%
CDS Percentage 76.58%
Ka/Ks Ratio 0.15376 (Ka = 0.1594, Ks = 1.037)

Limd1 ENSRNOG00000004837 (Rat)

Gene Details

LIM domains containing 1 (Limd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006554, Rat)

Protein Percentage 74.96%
CDS Percentage 76.09%
Ka/Ks Ratio 0.15803 (Ka = 0.1634, Ks = 1.0341)

Genome Location

Sequence Coding sequence

Length: 2001 bp    Location: 75218421..75176991   Strand: -
>XM_004835044.1
ATGAGCCCTGGGTCCTCGCCCCGGGCCGGACTCGAGCGCCGCCCTCCGGCTTCCTCCCCGCTCCTCCGCTGCCCGCCGCCCCTCCTCCAGCCGCGGGCCCCCTGCGAGGGCCCGGACACCTGCGCGCCGGGCAGCATGGACAAGTACGATGACCTGGGCCTGGAGGCCAGCAAGTTCATCGAGGACCTGAACATGTACGAGGCCTCCAAGGACGGGCTCTTCCGCGTGGACAGGGGCGCGGGCAACAACCCTGAGTTTGAGGAGACCCGCAGGCTGTTCGCCACCAAGATGGCCAAGATCCACCTCCAGCAGCAGCAGCTGTTGCAGGAAGAGCCGCTGCCCCGGGGCGGCCAGGGTCCTGTCCACGGCAGGGGCCACCCAGGCCAAAAGCCTGCTGCCGACGGGGCTGCTAAGCCCCCTCTCTCGGCCTCCGCAGGGGCACCTGGGGTGGCTGGCTCCGCGGTTCCCTGGCAGACCTCGCACCCAGCCCCGGAGCAGAAGGCTGGGCCTTGTGACCCGGGCCCAAGGCCTGGCAGCCAGGATCGGGCAGCCAGGCAGGGCCTGGGGAGCTCGGAGAGCTCTGCTGGCCACCAGCCGGGCTCCTGCGAAGACCCGGCCTGCCTCACTCACGGAGACTACTACGACAACCTGTCTCGGTCTCCGGCAAGCCCCTCTTGGGGTGACAGGCCAGGTGTGTCCCCCAGCATTGGCCTGGGGACAGGGAGCAGGTGGCCAGGTGCCCCCGGGAGTGATCTCTCATTGCTCAGACCAGGTGGGGACCCGCACCTGTACTGGCCACAGCTGTCCTCCGACAGTGGCCTCCATGCCCAGGACAGTAGTGGTGGCCCCGGCAGTGAGAAGCCAGCAGGCCTCTGGTCCACCGCCTCATCCCAGCGGGTAAGCCCGCTCCCTCCGTCCCTGGGCCTGGAGAACGGGGCCCCCATGCAGCCCCAGAGTCCTCTAGTGTCTGTGCCCCCGGCCTCCAGCCAGGGAGCCCTCCAGAGAGCAAACTCGGAGCTGGGCTGTGAGGCTTCAGGCACCAGGCCCAAGCCCACCGAGGACCCCCAGCCCTGGTTCCAGGACGGGCCCAAGGCTCACCTTTCCGGCTCTGCCTCTGGGCCCAAGCTCAGCCCCGCCGGCCCCGTGCTCCCAGTGCTGCCTTCCCTGCCAGAGCTGTCGTGCAGAGAGGGTCCCACTGGCTGGTGCCCTGATGGCAGCCTGGGCCCAGGGCTCCCAGAGGCCCCTGGCTCACCCAGGGTGAGGCTGCCCTGCCAGACGCTCCTCCCCGGCCCTGAGCTCGGCCCCTCCGCTGTGGAACTGAAGTTAGAAGCCCTTACCCAGCGCCTGGAGCGAGAGCTGGACGCCCACCCGAAGGCCGACTACTTTGGAGCCTGCGTGAAATGCAGCAAAGGAGTGTTTGGGGCCGGCCAGGCCTGCCAGGCCATGGGCAACCTCTACCACGACGCCTGCTTTACCTGTGCCTCCTGCAGCCGGAGACTGAGAGGAAAAGCCTTCTACTTCGTCAACGGCAAAGTATTCTGTGAGGAAGACTTCCTGTACTCTGGCTTCCAGCAGTCTGCCGACAGATGTTTTCTTTGTGGACATCTGATCATGGACATGATCCTGCAGGCCCTGGGGAAGCCCTACCACCCCGGCTGTTTCCGCTGTGTCATCTGTAACGAGTGCCTGGATGGGGTCCCCTTCACGGTGGACTCAGAGAACAAGATCTACTGTGTCCGAGATTACCACAAGGTGCTGGCCCCGAAGTGTGCAGCCTGCTGGCTCCCCATCCTCCCGCCCAAGGGCTCAGACGAGACGATCCGCGTGGTGTCCATGGACAGAGACTACCACGTGGAGTGCTACCGCTGCGAGGACTGCGGCCTGGAGCTCAATGACGAAGACGGTCACCGCTGCTACCCCCTGGAGGACCACCTCTTCTGCCACGCGTGCCACGTGAAGAGGCTGGAGAAAGGGCCCTCGCCCGCGGGCCTCCACTTCTAG

Related Sequences

XP_004835101.1 Protein

Limd1 PREDICTED: LIM domain-containing protein 1 [Heterocephalus glaber]

Length: 666 aa      View alignments
>XP_004835101.1
MSPGSSPRAGLERRPPASSPLLRCPPPLLQPRAPCEGPDTCAPGSMDKYDDLGLEASKFIEDLNMYEASKDGLFRVDRGAGNNPEFEETRRLFATKMAKIHLQQQQLLQEEPLPRGGQGPVHGRGHPGQKPAADGAAKPPLSASAGAPGVAGSAVPWQTSHPAPEQKAGPCDPGPRPGSQDRAARQGLGSSESSAGHQPGSCEDPACLTHGDYYDNLSRSPASPSWGDRPGVSPSIGLGTGSRWPGAPGSDLSLLRPGGDPHLYWPQLSSDSGLHAQDSSGGPGSEKPAGLWSTASSQRVSPLPPSLGLENGAPMQPQSPLVSVPPASSQGALQRANSELGCEASGTRPKPTEDPQPWFQDGPKAHLSGSASGPKLSPAGPVLPVLPSLPELSCREGPTGWCPDGSLGPGLPEAPGSPRVRLPCQTLLPGPELGPSAVELKLEALTQRLERELDAHPKADYFGACVKCSKGVFGAGQACQAMGNLYHDACFTCASCSRRLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDMILQALGKPYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACWLPILPPKGSDETIRVVSMDRDYHVECYRCEDCGLELNDEDGHRCYPLEDHLFCHACHVKRLEKGPSPAGLHF