Details from NCBI annotation

Gene Symbol Cspg5
Gene Name chondroitin sulfate proteoglycan 5 (neuroglycan C), transcript variant X2
Entrez Gene ID 101706513

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CSPG5 ENSCPOG00000010149 (Guinea pig)

Gene Details

chondroitin sulfate proteoglycan 5 (neuroglycan C)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009114, Guinea pig)

Protein Percentage 87.58%
CDS Percentage 88.12%
Ka/Ks Ratio 0.16835 (Ka = 0.0686, Ks = 0.4072)

CSPG5 ENSG00000114646 (Human)

Gene Details

chondroitin sulfate proteoglycan 5 (neuroglycan C)

External Links

Gene Match (Ensembl Protein ID: ENSP00000373244, Human)

Protein Percentage 85.42%
CDS Percentage 86.43%
Ka/Ks Ratio 0.17314 (Ka = 0.0796, Ks = 0.4596)

Cspg5 ENSMUSG00000032482 (Mouse)

Gene Details

chondroitin sulfate proteoglycan 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000035058, Mouse)

Protein Percentage 82.2%
CDS Percentage 82.13%
Ka/Ks Ratio 0.13718 (Ka = 0.099, Ks = 0.7216)

Cspg5 ENSRNOG00000020833 (Rat)

Gene Details

chondroitin sulfate proteoglycan 5 (neuroglycan C) (Cspg5), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028278, Rat)

Protein Percentage 82.55%
CDS Percentage 82.11%
Ka/Ks Ratio 0.13439 (Ka = 0.0983, Ks = 0.7313)

Genome Location

Sequence Coding sequence

Length: 1611 bp    Location: 73862514..73871684   Strand: +
>XM_004834970.1
ATGGGCAGCGCAGCCGAGGCTGAAGAGCTGGCAAAGAGCGGCCTGGCATGGGAGCCGCATGCCAACGACACACGGGAGGTGGGCCTTCCAGCTGCTGGGGACGATGATCAATTGTGGAGGGCGCCAGGCGGCGACCTGGGCCCTGTGCCCCCCGGGGCCGAGTTCGGGCCTGAGGAGGCGCCCAAGGCCTCAGCTGCGGTCACCCGCACTGTCTGGCTGGAGGCTGAGGATGCAGGCCTTGGCGGGGTGACTGCAGAGGCGGGCAGTGGCGACACCCAGGCCTTGCCAGCCACGCTCCTGGCTCCCGACGACACCCTGGAGCAGTCAACGATACCCCCCAGCCCCCCTGAGGCCACTGAAGCTGGGGCACCGCCTTTGCCCACCACAGCCCACCAGCCGAGCCCACGCCCCAAACTCCCCAAGGAGAGCCCCATGGAGGTCTGGCTGAACCTGGGCAGCAGCACCCCCGATCCACAAGAGCCAGGGCCCACTGACCCCATTCCAGGCACCCTAGAGCCCCAGCCAGCCTCAGAAATCATCGACATCGACTACTTCGAAGGACTGGATGGTGATGGTCGAGATGCAGACCTGGGGAGCTTCCCAGGGTCACCAGGAACCTCAGAGCACCACCCGGACCCTGAGGGGGAGACCCCTTCCTGGAGCCTGCTTGACTTGTACGATGACTTCACCCCCTTTGATGAGTCGGATTTCTACCCCACCACGTCCTTCTATGACGACTTGGAGGAAGACGAGGAGGAAGAGGAGGATGACAAGGATGCAGTGGGAGTCGGAGACCTGGAAGATGAAAATGACCTGCACACGGAGAAGCCCGGCGCAGGGCCAGGAGCAGGCCAGCCCACCAGTCAGTGGCATGCCGTCCCTCCGCAGCACACCCTGGGGATGGTCCCTGGCAGCAGTATTGCTGTCAGGCCCCGCCCAGGAGAGCCAGGCAGGGACCTGGCCTCCAGTGAAAATGGCACCGAGTGTCGCAGCGGCTTTGTGCGCCATAACGGCTCCTGCCGATCTGTGTGCGACCTCTTCCCCAGCTACTGTCACAATGGCGGCCAGTGCTACCTAGTGGAGAACATAGGGGCCTTCTGCAGGTGCAACACGCAGGACTACATCTGGCACAAGGGCATGCGCTGCGAGTCCATCATCACCGACTTCCAGGTCATGTGCGTGGCCGTGGGCTCAGCGGCGCTCGTGCTCCTCCTGCTCTTCATGATGACCGTGTTCTTCGCCAAGAAGCTCTATCTGCTCAAGACGGAGAACACCAAGCTGCGGAGGACCAACAAATTCCGGACCCCATCTGAGCTCCACAATGATAACTTCTCCCTCTCCACCATTGCGGAGGGCTCTCACCCAAATGTAAGGAAACTTTGCGACACTCCCCGTATCTCCTCCCCCCATGCCCGTGCCTTGGCTCACTATGATAACGTTGTTTGTCAGGATGATTCCAGTGCTCCCCACAAAATCCAGGAAGTTCTCAAGTCCTGCCTGAAAGAGGAGGAGCCCTTTAACATTCAGAACTCCATGTCGCCCAAGCTGGAGGGTGGCAAAGGGGACCAGGCTGACGTGGACGTGAACTGCCTTCAGAATAACTTAACCTAA

Related Sequences

XP_004835027.1 Protein

Cspg5 PREDICTED: chondroitin sulfate proteoglycan 5 isoform X2 [Heterocephalus glaber]

Length: 536 aa      View alignments
>XP_004835027.1
MGSAAEAEELAKSGLAWEPHANDTREVGLPAAGDDDQLWRAPGGDLGPVPPGAEFGPEEAPKASAAVTRTVWLEAEDAGLGGVTAEAGSGDTQALPATLLAPDDTLEQSTIPPSPPEATEAGAPPLPTTAHQPSPRPKLPKESPMEVWLNLGSSTPDPQEPGPTDPIPGTLEPQPASEIIDIDYFEGLDGDGRDADLGSFPGSPGTSEHHPDPEGETPSWSLLDLYDDFTPFDESDFYPTTSFYDDLEEDEEEEEDDKDAVGVGDLEDENDLHTEKPGAGPGAGQPTSQWHAVPPQHTLGMVPGSSIAVRPRPGEPGRDLASSENGTECRSGFVRHNGSCRSVCDLFPSYCHNGGQCYLVENIGAFCRCNTQDYIWHKGMRCESIITDFQVMCVAVGSAALVLLLLFMMTVFFAKKLYLLKTENTKLRRTNKFRTPSELHNDNFSLSTIAEGSHPNVRKLCDTPRISSPHARALAHYDNVVCQDDSSAPHKIQEVLKSCLKEEEPFNIQNSMSPKLEGGKGDQADVDVNCLQNNLT