Details from NCBI annotation

Gene Symbol Lamp3
Gene Name lysosomal-associated membrane protein 3, transcript variant X2
Entrez Gene ID 101725065

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LAMP3 ENSCPOG00000015232 (Guinea pig)

Gene Details

lysosomal-associated membrane protein 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013729, Guinea pig)

Protein Percentage 63.26%
CDS Percentage 74.42%
Ka/Ks Ratio 0.49068 (Ka = 0.2665, Ks = 0.5432)

LAMP3 ENSG00000078081 (Human)

Gene Details

lysosomal-associated membrane protein 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000265598, Human)

Protein Percentage 63.94%
CDS Percentage 74.12%
Ka/Ks Ratio 0.50875 (Ka = 0.2707, Ks = 0.532)

Lamp3 ENSMUSG00000041247 (Mouse)

Gene Details

lysosomal-associated membrane protein 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000080556, Mouse)

Protein Percentage 55.75%
CDS Percentage 70.01%
Ka/Ks Ratio 0.52171 (Ka = 0.3428, Ks = 0.6571)

Lamp3 ENSRNOG00000022792 (Rat)

Gene Details

lysosomal-associated membrane protein 3 (Lamp3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000038456, Rat)

Protein Percentage 56.16%
CDS Percentage 69.38%
Ka/Ks Ratio 0.5014 (Ka = 0.3449, Ks = 0.6879)

Genome Location

Sequence Coding sequence

Length: 1302 bp    Location: 73264281..73297793   Strand: +
>XM_004834928.1
ATGTCGCCCCAGCTCTCTGCAGTGGCAGTGTTCTTCCTGTCCCTGGCCGTAATCTTGCATGGTGGTCATCAAGTAAGAGTAAAAGCATTTCCAGGGACCAGAAACTGTCTTCCACCAACTGCAGCCGCAACCGGACAGGCCACAGCCAACCCTCTCCTGCAACTGACGAAGGAAGTGTCACACAAAACTTCCGCAGCCAGCTCAACAGGCAGTCACACCACCTCAAAAACAGCCGGGAAAACCTCCAAGAACCCAACACACACAATCACAACTACCTCACAAACTCCAGGAAGTCCCTCATCCTCCAGCCCAGTCATCTACACCCTGGCCACCCCAAACAACACACACACACTTCCTCCAATTACTGAAGCTACCCTCGGCCCCAGTTTGGCTCCTCATTCCCAGCCACCCCGGTCCTCTCCAAGCTCTACACCCAGAGCCAGCCCATCCACTGGCAGCCACACGACGACGTGGAAAACCACCCAACCCGGGAGCCAGTCCACTCCCTCCAAAACGCTGTTCACAACACCACACAAAAGCACAGGCGGTCAGAAACCTCCTCCACCCACCCTTTCCCCAGGAACTTCTATAACCACACCCAATGGCACCCCAACAGCCTCCCCTGGAACTTCCACAGCCACACACAATGGCACCCAAAGAACAGCCTCCCCTGCCACCACAGTTCCTGGGGCTACCCTTGTGCCTCAGCCATCGTCTGCCAAGACCGGAACTTATCAAGTTCTAAACGGAAGTAGGCTCTGCATAAAAGCAGAGATGGGGATAGAGCTGATTGTTCAAGAAACAAAGTCGGTTTTTTCACCTCAGAGATACTTCAACATCGACCCCAACACAACCAAAGCCTCTGGCAATTGTGGCTTCCGAAAATCCAACCTTCTCTTGAGTTTCCCTGGTGGATCTGTGAATCTCACATTTACCAAGGAAGAAAATTCATATTATATCAGTGAAGTAGGAGCCTATCTGACTGTCTCAAATCCAGAGAAAGCTTTCCAAGGGTTGAAAACAGGGATGGTGATGTTTGAGACAGTGGTCGGCCATTCCTTCAAGTGTGTGAGCAAGCAGAGCACACAGCTGTCCGCCCAGCTTCAGCTGAAAACAATGAACGTCCAACTTCAAGCCTTTGACTTTGAAGGAGACCACTTTGGAAATGTGGACGAGTGCTCCTCGGACTACACAGTTGTGCTTCCGGTGATCGGGGCCATCGTGGTTGGCCTCTGCTTTTTGGGTCTGTGCCTCAACGCGACCCGTCTAAGGCGTCAGCCAGGCGGGTACCAGAGGATCTGA

Related Sequences

XP_004834985.1 Protein

Lamp3 PREDICTED: lysosome-associated membrane glycoprotein 3 isoform X2 [Heterocephalus glaber]

Length: 433 aa      View alignments
>XP_004834985.1
MSPQLSAVAVFFLSLAVILHGGHQVRVKAFPGTRNCLPPTAAATGQATANPLLQLTKEVSHKTSAASSTGSHTTSKTAGKTSKNPTHTITTTSQTPGSPSSSSPVIYTLATPNNTHTLPPITEATLGPSLAPHSQPPRSSPSSTPRASPSTGSHTTTWKTTQPGSQSTPSKTLFTTPHKSTGGQKPPPPTLSPGTSITTPNGTPTASPGTSTATHNGTQRTASPATTVPGATLVPQPSSAKTGTYQVLNGSRLCIKAEMGIELIVQETKSVFSPQRYFNIDPNTTKASGNCGFRKSNLLLSFPGGSVNLTFTKEENSYYISEVGAYLTVSNPEKAFQGLKTGMVMFETVVGHSFKCVSKQSTQLSAQLQLKTMNVQLQAFDFEGDHFGNVDECSSDYTVVLPVIGAIVVGLCFLGLCLNATRLRRQPGGYQRI