Details from NCBI annotation

Gene Symbol Abcf3
Gene Name ATP-binding cassette, sub-family F (GCN20), member 3, transcript variant X4
Entrez Gene ID 101715381

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ABCF3 ENSCPOG00000012469 (Guinea pig)

Gene Details

ATP-binding cassette, sub-family F (GCN20), member 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011220, Guinea pig)

Protein Percentage 96.61%
CDS Percentage 92.34%
Ka/Ks Ratio 0.04792 (Ka = 0.0168, Ks = 0.3495)

ABCF3 ENSG00000161204 (Human)

Gene Details

ATP-binding cassette, sub-family F (GCN20), member 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000411471, Human)

Protein Percentage 95.77%
CDS Percentage 90.03%
Ka/Ks Ratio 0.04301 (Ka = 0.0204, Ks = 0.4754)

Abcf3 ENSMUSG00000003234 (Mouse)

Gene Details

ATP-binding cassette, sub-family F (GCN20), member 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000003319, Mouse)

Protein Percentage 94.78%
CDS Percentage 86.79%
Ka/Ks Ratio 0.0397 (Ka = 0.0272, Ks = 0.6858)

Abcf3 ENSRNOG00000001710 (Rat)

Gene Details

ATP-binding cassette, subfamily F (GCN20), member 3 (Abcf3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002327, Rat)

Protein Percentage 94.36%
CDS Percentage 87.45%
Ka/Ks Ratio 0.04444 (Ka = 0.029, Ks = 0.6522)

Genome Location

Sequence Coding sequence

Length: 2130 bp    Location: 72384076..72376045   Strand: -
>XM_004834900.1
ATGGCGACTTGCGCCGAGATCTTGCGGAGCGAGTTCCCGGAAATTGACGGGCAGGTCTTCGACTACGTGACCGGCGTCTTGCACAGCGGCAGTGCGGACTTCGAATCTGTGGATGACCTGGTGGAAGCCGTGGGGGAACTGTTGCAGGAGGTGTCCGGGGACAGCAAGGATGACGCGAGCATCAGGGCCGTGTGCCAGCGCATGTACAACACTCTGCGCCTGGCTGAGCCACAGAGCCAGGGACACAGCCAGGTTCTTCTGGACGCCCCCATCCAATTGTCAAAGATAGCGGAGAACTATGACTGTGACATGAGACTTCCAGGGCTGCTAAAGAGGGAACAGTCCTCGACAGTGAATGCAAAGAAGCTGGAGAAGGCTGAGGCTCGACTGAAGGCCAAACAGGAGAAGCGCTCAGAGAAAGACCCGCTGAAGACCAGCAACCCTCTAGTCCTAGAAGAGGCATCAGCCAGCCAGGCAGGTAGCAGAAAGGAGAATCGGTTAGAATCATCTGGCAAGAACAAGTCCTATGATGTGCGAATTGAGAACTTTGATGTGTCTTTTGGTGATAGGATACTGCTGGCTGGAGCAGATGTGAACCTGGCATGGGGCCGCCGCTATGGGTTGGTAGGGCGGAATGGGCTGGGGAAGACGACCTTGCTGAAGATGCTGGCCACCCGGAGCCTGCGGGTTCCAGCCCACATCTCCCTGCTGCATGTGGAGCAGGAGGTTGCCGGGGATGAAACTCTTGCCCTGCAGAGCGTACTAGAGAGCGACAGTGTGCGAGAGGACCTGCTGCGGCGGGAGCGGGAGCTCAGTGCCCAGATTGCTGCGGGCAGGGCAGAGGGCTCAGAAGCTGCACAGCTGGCTGAAATCTACGCCAAGTTGGAGGAGATTGAGGCCGACAAGGCACCCGCCAGGGCATCAGTCATTCTTGCTGGGCTTGGGTTTACCCCTAAAATGCAGCAGCAGCCCACCCGGGAGTTCTCAGGAGGCTGGAGGATGAGACTGGCCTTGGCCCGGGCCCTGTTTGCTAGGCCAGACCTTCTGCTGTTGGATGAACCCACAAACATGCTGGATATCAGGGCCATCCTGTGGCTGGAGAATTATCTGCAGACATGGCCCTCCACAATCCTAGTCGTCTCTCACGACCGCAACTTCCTGAATGCCATCACCACAGACATCATCCACCTGCACAGCCAGCGGTTGGACAGTTACCGGGGAGACTTTGAGACCTTCATCAAGAGCAAGCAGGAGCGGCTGCTCAATCAGCAGCGCGAGTATGAAGCACAACAGCAGTATCGCCAGCACATCCAGGTTTTCATTGACCGCTTCCGCTACAATGCCAACAGGGCCTCTCAAGTGCAGAGTAAACTCAAGATGCTCGAGAGGCTACCGGAGCTAAAGCCAGTGGACAAGGAATTGGAGGTGGTGATAAAGTTCCCAGATGGGTTTGAGAAGTTCTCACCGCCAATTCTGCAGCTGGATGAGGTGGACTTCTACTACAATCCTGAGCATATCATCTTCAGTCGCCTGTCGGTCTCTGCCGATCTAGAGTCTCGCATATGTGTGGTTGGGGAGAATGGGACGGGAAAGTCCACCATGCTGAAGCTGCTCATGGGGGACCTGGCGCCTGTCCGAGGTATCAGACACGCCCACAGGAATCTGAAGATTGGCTACTTCAGCCAGCACCATGTGGAGCAGTTGGATCTGAACGTCAGCGCTGTGGAGCTGCTGGCACGCAAGTTCCCAGGCCGGCCGGAGGAGGAGTATCGCCACCAGCTGGGCCGCTATGGTGTCTCGGGGGAGCTGGCCATGCGGCCTGTTGCCAGCTTGTCTGGAGGCCAGAAGAGCCGGGTGGCTTTCGCTCAGATGACCATGCCCTGCCCCAACTTCTACATCCTGGACGAGCCCACAAACCACCTGGACATGGAGACGATCGAGGCCCTGGGCCACGCACTCAACAGTTTCAGGGGCGGCGTGATCCTGGTGTCCCATGATGAGCGCTTCATCCAGCTGGTGTGCCGCGAGCTGTGGGTGTGTGAAGGAGGCAATGTCACGAGGGTCGAGGGGGGCTTTGACCAGTACCGAGCCCTCCTCCAGGAGCAGTTCCGCCGGGAGGGCTTTCTCTAG

Related Sequences

XP_004834957.1 Protein

Abcf3 PREDICTED: ATP-binding cassette sub-family F member 3 isoform X4 [Heterocephalus glaber]

Length: 709 aa      View alignments
>XP_004834957.1
MATCAEILRSEFPEIDGQVFDYVTGVLHSGSADFESVDDLVEAVGELLQEVSGDSKDDASIRAVCQRMYNTLRLAEPQSQGHSQVLLDAPIQLSKIAENYDCDMRLPGLLKREQSSTVNAKKLEKAEARLKAKQEKRSEKDPLKTSNPLVLEEASASQAGSRKENRLESSGKNKSYDVRIENFDVSFGDRILLAGADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSLRVPAHISLLHVEQEVAGDETLALQSVLESDSVREDLLRRERELSAQIAAGRAEGSEAAQLAEIYAKLEEIEADKAPARASVILAGLGFTPKMQQQPTREFSGGWRMRLALARALFARPDLLLLDEPTNMLDIRAILWLENYLQTWPSTILVVSHDRNFLNAITTDIIHLHSQRLDSYRGDFETFIKSKQERLLNQQREYEAQQQYRQHIQVFIDRFRYNANRASQVQSKLKMLERLPELKPVDKELEVVIKFPDGFEKFSPPILQLDEVDFYYNPEHIIFSRLSVSADLESRICVVGENGTGKSTMLKLLMGDLAPVRGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGRPEEEYRHQLGRYGVSGELAMRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGHALNSFRGGVILVSHDERFIQLVCRELWVCEGGNVTRVEGGFDQYRALLQEQFRREGFL