Details from NCBI annotation

Gene Symbol Chrd
Gene Name chordin, transcript variant X3
Entrez Gene ID 101704243

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHRD ENSCPOG00000007354 (Guinea pig)

Gene Details

chordin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006631, Guinea pig)

Protein Percentage 89.91%
CDS Percentage 90.28%
Ka/Ks Ratio 0.18324 (Ka = 0.0519, Ks = 0.2832)

CHRD ENSG00000090539 (Human)

Gene Details

chordin

External Links

Gene Match (Ensembl Protein ID: ENSP00000204604, Human)

Protein Percentage 88.72%
CDS Percentage 88.44%
Ka/Ks Ratio 0.16167 (Ka = 0.0603, Ks = 0.3732)

Chrd ENSMUSG00000006958 (Mouse)

Gene Details

chordin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000007171, Mouse)

Protein Percentage 84.7%
CDS Percentage 83.44%
Ka/Ks Ratio 0.1426 (Ka = 0.0862, Ks = 0.6045)

Chrd ENSRNOG00000001750 (Rat)

Gene Details

chordin (Chrd), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002394, Rat)

Protein Percentage 84.18%
CDS Percentage 82.56%
Ka/Ks Ratio 0.13042 (Ka = 0.0889, Ks = 0.6816)

Genome Location

Sequence Coding sequence

Length: 2889 bp    Location: 72209843..72201556   Strand: -
>XM_004834858.1
ATGCCGAGCCTTCCGGCCCCGCCGGCCCCGCGGCTGCTCCTCGGGCTGCTGCTGCTCGGCTCCCGGCCGGCCCGCGGCGCCGGCCCCGAGCCTCCCGTGCTGCCCATTCGCCCCGAGAAGGAGCCGCTGCCCGTGCGGGGCGCGGCAGGCTGCTCCTTCGGCGGGAAGGTCTACGCTGTGGACGAGACGTGGCACCCGGACCTGGGGGAGCCCTTCGGGGTGATGCGCTGCGTGCTGTGCGCCTGCGAGGCGCCTCAGTGGGGTCGTCGCGGGAGGGGCCCTAGCAGGGTCAGCTGCAAAAACATCAAGCCCGAGTGCCCAAGCTTGGCCTGCGGGCAGCCTCGCCAGCTGCCAGGACACTGCTGCCAGACCTGCCCCCAGGAGCGCAGCGACTTGGAGCAGCCGCCACCAAGCCTGTCCTTCGAATATCCGAGGGACCCTGAGCACCGCAGTTACAGCCACCGCGGCGAGTCGGGGCCCGAGGAGCGCGCGCGCGCCGACGGCCACTCGGACTTCGTGGCGCTGCTGACAGGGCCGAGGTCGCAGGCCGTGGCACGTGCCCGGGTCTCGCTGCAGCGCTCTAGCCTCCGCTTCTCCATCTCTTACCGGCAGCTGGACCGCCCCAGCCGGGTCCGCTTCTCAGATGCCACGGGCAGCGTCTTGTTTGAACACCCGGCAGCTCCCACCAGAGACGGCCTGGTCTGTGGGGTGTGGCGGGCGGTGCCTCGGTTGTCCCTGCGGCTCCTTAGGGCAGAACAGCTCCATGTGGCACTCTTGACACCCACTCACCCCTCAGGGGAGGTCTGGGGGCCTCTTATCCGGCACCGGGCCCTGGCTGCAGAGACCTTCAGTGCCGTCCTGACTCTGGAAGGCCCCCAGCAGCAGGGCGCAGGGGGCATTGCTGTGCTCACCCTCAGCGACACGGAGGACTCCTTGCATTTTCTGCTGCTCTTCCGGGGGCTGCTGGAACCCAGGACCCAGGTTCCCGTGAGGCTCCAGATTCTACACGAGGGGGAGCTGCTGCGAGAACTCCAGGCCAACACCTCAGTCCAGGACCTGGGCTTTGCTGAGGTGCTGCCCAGCCTGACAGCACAGGAGATGGACTGGCTGGTGCTGGGGGAGCTGCAGATGGCGCTGGAGAGGATGGGCGGACCAGAGCTGCGCATCAGTGGGCACATTGCTGCCAGGCAGAGCTGCGATGTCCTACAAAGTGTCCTTTGTGGGGCCGATGCCCTGGTCCCTGTTCACACGGGTGCCGCCGGCTCCGCCAGCCTCACACTACTAGGAAACGGCTCTCTGGTCTACCAGGTCCAAGTGGTGGGTACAGGCAGTGAGGTGGTGGCCATGACACTGGAGACCAAGCCTCAGCGGAGGAATCAGCGGACTGTCCTGTGCCACATGGCTGGACTCCAGCCCGGAGGACACAGGGCTGTGGGAATCTGCCCTGGGCTGGGTGCCCGAGGGGCTCATATGCTGCTGCAGAATGAGCTGTTCCTGAATGTGGGCACCAAGGACCTTCCGGACGGAGAGCTTCGGGGGCATGTGGCCACCCTGCCCTACAGTGGGCACGGTGCTCGCCATGAGACGTTACCTGTGCTCCTGGCAGGAGCTCTGGTGCTGCCCCCTGTGCAGAGCCAGGCAGCGGGGCATGCCTGGCTCTCCCTGGATACACACTGTCACCTGCACTATGAAGTGCTGCTGGCTGGGCTTGGTGGCTCAGAGCAGGGCACTGTCACAGCCCACCTCCTAGGGCCTCCTGGGATGCCGGGGCCCCGGCGGCTGCTGAAGGGATTCTATGGCCCTGAGGCCCAGGGTGTGGTGAAGGACCTGGAGCCCGAGCTACTGCGACACCTGGCGCGGGGCACTGCCTCCCTGCTGGTCACCACCAAGGGGAGCCCCCGAGGAGAGCTCCGAGGGCAGGTGCACATTGCCAACCAATGCGAGGTGGGGGGCCCGCGCCTCGCTGCGGGAGGTGCGGAGGGGACGCAGACGCCTGGGGCTTCGGATGCAGCTGTCCAACATGTGCTGCCCGCTGCCCCCGTCCCCGAGGCCCCTGCACCTGCCAAATCTGGAGGGTCTGGGCGGCCCCGAGACCCCAACATGTGCTTCTTCGAGGGGCAGCAGCGCCCCCACGGGGCTCGCTGGGCACCCAACTACGACCCACTCTGCTCCCTCTGCACCTGCCAGAGACGAACGGTGATCTGTGACCCCGTGGTGTGCCCGTCCCCCAGCTGCCCACGCCCGGTGCAGGCATCTGACCAGTGCTGCCCAGTGTGCCCCGAGAAGCAAGACACCAGAGACCTCCCAGGGCTGCCCAGGAGCCGCGACCCGGGAGAGGGTTGCTATTTTGATGGTGACCGAAGCTGGCGGGCAGCGGGCACCCGGTGGCACCCTGTTGTGCCCCCCTTTGGCTTAATTAAGTGTGCTATCTGCACCTGCAAGAGGGGCACTGGAGAGGTGCACTGTGAGAAGGTGCAGTGTCCCCGGCTGGCCTGTGCCCAGCCTGTCCGCGCCAACCCCACTGACTGCTGCAAACAGTGTCCAGGTGAGGAGCCTGGGCACCAAGACCTTACACTTGGGGTTGGGACAGGGTCCCACCCACAGCTGGGGGACTCCATGCAGGCTGATGGCCCCCGGGGCTGCCGTTTTGCTGGACAGTGGTTCCCGGAGAGCCAGAGCTGGCACCCGTCAGTACCCCCCTTTGGGGAGATGAGCTGTATCACCTGCAGGTGTGGGGCAGGGGTGCCCCACTGTGAGCGGGATGACTGCTCACTGTCACTGTCCTGTGGCTCGGGGAAGGATGGTCGATGCTGCTCCCACTGCACACCTCGGCGGTCTCCCGAGACCAGGACTGTTCCAGAGCTGGAAAAAGAAGCTGAAGTCTCCTAG

Related Sequences

XP_004834915.1 Protein

Chrd PREDICTED: chordin isoform X3 [Heterocephalus glaber]

Length: 962 aa      View alignments
>XP_004834915.1
MPSLPAPPAPRLLLGLLLLGSRPARGAGPEPPVLPIRPEKEPLPVRGAAGCSFGGKVYAVDETWHPDLGEPFGVMRCVLCACEAPQWGRRGRGPSRVSCKNIKPECPSLACGQPRQLPGHCCQTCPQERSDLEQPPPSLSFEYPRDPEHRSYSHRGESGPEERARADGHSDFVALLTGPRSQAVARARVSLQRSSLRFSISYRQLDRPSRVRFSDATGSVLFEHPAAPTRDGLVCGVWRAVPRLSLRLLRAEQLHVALLTPTHPSGEVWGPLIRHRALAAETFSAVLTLEGPQQQGAGGIAVLTLSDTEDSLHFLLLFRGLLEPRTQVPVRLQILHEGELLRELQANTSVQDLGFAEVLPSLTAQEMDWLVLGELQMALERMGGPELRISGHIAARQSCDVLQSVLCGADALVPVHTGAAGSASLTLLGNGSLVYQVQVVGTGSEVVAMTLETKPQRRNQRTVLCHMAGLQPGGHRAVGICPGLGARGAHMLLQNELFLNVGTKDLPDGELRGHVATLPYSGHGARHETLPVLLAGALVLPPVQSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQGTVTAHLLGPPGMPGPRRLLKGFYGPEAQGVVKDLEPELLRHLARGTASLLVTTKGSPRGELRGQVHIANQCEVGGPRLAAGGAEGTQTPGASDAAVQHVLPAAPVPEAPAPAKSGGSGRPRDPNMCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCPSPSCPRPVQASDQCCPVCPEKQDTRDLPGLPRSRDPGEGCYFDGDRSWRAAGTRWHPVVPPFGLIKCAICTCKRGTGEVHCEKVQCPRLACAQPVRANPTDCCKQCPGEEPGHQDLTLGVGTGSHPQLGDSMQADGPRGCRFAGQWFPESQSWHPSVPPFGEMSCITCRCGAGVPHCERDDCSLSLSCGSGKDGRCCSHCTPRRSPETRTVPELEKEAEVS