Details from NCBI annotation

Gene Symbol Tbccd1
Gene Name TBCC domain containing 1, transcript variant X3
Entrez Gene ID 101724693

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TBCCD1 ENSCPOG00000026064 (Guinea pig)

Gene Details

TBCC domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019747, Guinea pig)

Protein Percentage 89.41%
CDS Percentage 89.65%
Ka/Ks Ratio 0.19207 (Ka = 0.0551, Ks = 0.2871)

TBCCD1 ENSG00000113838 (Human)

Gene Details

TBCC domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000411253, Human)

Protein Percentage 88.15%
CDS Percentage 89.47%
Ka/Ks Ratio 0.26021 (Ka = 0.0681, Ks = 0.2616)

Tbccd1 ENSMUSG00000004462 (Mouse)

Gene Details

TBCC domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000004576, Mouse)

Protein Percentage 82.25%
CDS Percentage 82.61%
Ka/Ks Ratio 0.20432 (Ka = 0.1095, Ks = 0.536)

Tbccd1 ENSRNOG00000026458 (Rat)

Gene Details

TBCC domain containing 1 (Tbccd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036828, Rat)

Protein Percentage 80.97%
CDS Percentage 82.29%
Ka/Ks Ratio 0.21817 (Ka = 0.1165, Ks = 0.534)

Genome Location

Sequence Coding sequence

Length: 1674 bp    Location: 70187956..70215123   Strand: +
>XM_004834835.1
ATGGATCAGTCTGGAGTTCTCCTCTGGGTAAAAGCAGAACCCTTTATAGTGGGTGCCTTGCAGATCCCCCCTCCATCCAAGTTCAGTCTTCATTATCTCAAGAAGATAGCCACCTATGTGCGAACCCGTGCTATAGAGAGAGCTTACCCACGCATGTACTGGTCTACATGGAGGCATATTGCATGTGGGAAGCTGCAGTTGGCCAAGGATGTGGCATGGCTTTACTTCGAAATATTTGATAGTCTTTCGATGAGGTCGCCTGAGGAGCGCCTGGAGTGGTCTGAGATTCTGTCTAACTGCATATCTGAGAATGAAATCGAAAAGCAGAGAAATCAGGTTTCAGTGGACACCCTACAGTTTCTGCTCTTCCTGTACATACAGCAGTTAAATAGGGTCTCCCTGAGGACATCTCTGATTGGAGAAGAGTGGCCAAGTCCGAGAAACAGATCTCAGCCTCCTGACCCATCTGAAAAGTCCAAGTGCCATCATAAGAACTGGAATGATTACAGTCATCAGGCTTTTGTCTGTGACCATCTGTCAGATCTCCTTGAGCTGCTTTTAGATCCAGAACAACTCAGTGCATCATTTCATTCGACCCCTAGTAGTTCAGTCTCTCGAGAAGCTGTTGTGGCGCTCAGCTTTCTTATTGAAGGCACAGTGAGTAGAGCCGGAAGGATCTATCCACTCCACGAACTTGCACTGTGGCAACCACTACATGTAGACAGTGGCTTCTCAAAGATCTCTAAGACTTTCTCTTTCTACAAGCTGGAAGCCTGGTTGAGAGCCCATTTGACTGGGAATCCATATGGTACATCTGCTTGCTTCAAGTCAGGAAAGAAATTGGCTTGGGCTCACCAAGTTGAAGGTACGACCAAAAGGGCTAAGATTGCTTGTAATACTCATGTGGCCCCTGGGGTGCACCGAATGGTGGTGATGAGCCAGGTTTGCAAGCAGACGTTGGCCAAGAGCTCAGATACTCTGGTGGGGGCGCATGTCAGGATTCATCGTTGCAGTGAATCTTTTATATATCTGCTCTCTCCCTTACGATCTGTGACAATCGAGAAGTGTAGGAATAGCACCTTTGTCTTGGGCCCTGTAGAGACTGTTCTTCACCTCCACTCGTGTGACAGTGTTAAAGTTATTGCAGTTTGCCATCGTTTGACCATCTCTTCTACAACAAGTTGCATCTTTCACGTTTTGACACCTGTGCGCCCACTTATTCTCTCTGGGAACCAGAGCGTAACTTTTGCTCCATTTCATACCCATTACCCAATGCTAGAGGACCATATGGCCAGGACAGGCCTTGCTACAGTGCCTAACTATTGGGATAATCCAATGGTCATCTGCAGAGACAACAGTGACTCAAATGTCTTCCAGCTCTTACCCCCCTGTGACTTCTATGTATTTATTATTCCTTTTGAAATGGAAGGGGACACAACAGAGATACCTGGGGGTCTTCCACCTGCATATCAGAAGGCACTGAATCAAAGAGAAGAGAATATCCAGATCTGGCAGAAAACTGTGAAGGAAGCTCATTTGACAAAGGATCAAAGGAAACAGTTCCAGGTACTTGTGGAGAACAAGTTTTATGAATGGTTGGTTAATACAGGACATCGCCAACAGTTGGACAGTCTTGTACCCGCTGCCATCGGCTCCAAACAAGCAGCAGGATAG

Related Sequences

XP_004834892.1 Protein

Tbccd1 PREDICTED: TBCC domain-containing protein 1 isoform X3 [Heterocephalus glaber]

Length: 557 aa      View alignments
>XP_004834892.1
MDQSGVLLWVKAEPFIVGALQIPPPSKFSLHYLKKIATYVRTRAIERAYPRMYWSTWRHIACGKLQLAKDVAWLYFEIFDSLSMRSPEERLEWSEILSNCISENEIEKQRNQVSVDTLQFLLFLYIQQLNRVSLRTSLIGEEWPSPRNRSQPPDPSEKSKCHHKNWNDYSHQAFVCDHLSDLLELLLDPEQLSASFHSTPSSSVSREAVVALSFLIEGTVSRAGRIYPLHELALWQPLHVDSGFSKISKTFSFYKLEAWLRAHLTGNPYGTSACFKSGKKLAWAHQVEGTTKRAKIACNTHVAPGVHRMVVMSQVCKQTLAKSSDTLVGAHVRIHRCSESFIYLLSPLRSVTIEKCRNSTFVLGPVETVLHLHSCDSVKVIAVCHRLTISSTTSCIFHVLTPVRPLILSGNQSVTFAPFHTHYPMLEDHMARTGLATVPNYWDNPMVICRDNSDSNVFQLLPPCDFYVFIIPFEMEGDTTEIPGGLPPAYQKALNQREENIQIWQKTVKEAHLTKDQRKQFQVLVENKFYEWLVNTGHRQQLDSLVPAAIGSKQAAG