Sequence details NCBI ID: XM_004834811.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rtp1
Gene Name receptor (chemosensory) transporter protein 1
Entrez Gene ID 101717682

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RTP1 ENSCPOG00000001203 (Guinea pig)

Gene Details

receptor (chemosensory) transporter protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001088, Guinea pig)

Protein Percentage 94.68%
CDS Percentage 94.55%
Ka/Ks Ratio 0.07766 (Ka = 0.0243, Ks = 0.3133)

RTP1 ENSG00000175077 (Human)

Gene Details

receptor (chemosensory) transporter protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000311712, Human)

Protein Percentage 90.11%
CDS Percentage 92.52%
Ka/Ks Ratio 0.15043 (Ka = 0.0485, Ks = 0.3223)

Rtp1 ENSMUSG00000033383 (Mouse)

Gene Details

receptor transporter protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000043416, Mouse)

Protein Percentage 92.78%
CDS Percentage 89.1%
Ka/Ks Ratio 0.03963 (Ka = 0.0322, Ks = 0.8114)

Rtp1 ENSRNOG00000021992 (Rat)

Gene Details

receptor (chemosensory) transporter protein 1 (Rtp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029915, Rat)

Protein Percentage 93.92%
CDS Percentage 89.48%
Ka/Ks Ratio 0.03348 (Ka = 0.0272, Ks = 0.8129)

Genome Location

Sequence Coding sequence

Length: 792 bp    Location: 69658350..69655572   Strand: -
Raw sequence   
>XM_004834811.1
ATGAGGATTTTTAGACCGTGGAGACTGCGCTGCCCTGCCCTGCACCTGCCCTCGTTCCCCACGTTCTCGCTTAAGTGGACCTTGCCCACCTTCACCACTGACAAGGACATGTGTAAAAGTGTGACCACAGGTGAGTGGAAGAAAGTCTTCTATGAGAAGATGGAGGAGGCAAAGCCAGCTGACAGCTGGGACTTCATCATAGACCCCAACCTCAAGCACAATGTGCTGGCCCCTGGCTGGAAGCAGTACTTGGAGTTGCATGCCTCAGGCAGATTCCACTGCTCCTGGTGCTGGCACACCTGGCAGTCGCCCCACGTAGTCATCCTCTTCCACATGTACCTGGACCGCGCCCAGCACGCAGGCTCGGTGCGCATGCGCGTCTTCAAGCAGCTGTGCTACGAGTGCGGCACGGCGCGGCTGGACGAGTCCAGCATGCTGGAGGAGAACATCGAGAGCCTGGTGGACAACCTCATCACCAGCCTGCGCGAGCAGTGCTACGGGGAGCGTGGCGGCCAGTACCGCATCCACGTGGCCAGCCGCCGGGACACCCGGCGACACCGCGGCGAGTTCTGCGAGGCCTGCCAGGAGGGCATCGTGCACTGGAAGCCCAGCGAGAAGCTGCTGGAGGAGGAGGCCGCCACCTACACCTTCTCCCGCGCGCCCAGCCCCGCCAAGCCGCAGGCCGAGGAGGGCTCGGGCTGCAACTTCTTCTCCATCCCCTGGTGCTTGTTTTGGGCCACAGTCCTGCTGCTGATCATCTACCTGCAGTTCTCCTTCCGCAGCTCCGTCTAG

Related Sequences

XP_004834868.1 Protein

Rtp1 PREDICTED: receptor-transporting protein 1 [Heterocephalus glaber]

Length: 263 aa      
>XP_004834868.1
MRIFRPWRLRCPALHLPSFPTFSLKWTLPTFTTDKDMCKSVTTGEWKKVFYEKMEEAKPADSWDFIIDPNLKHNVLAPGWKQYLELHASGRFHCSWCWHTWQSPHVVILFHMYLDRAQHAGSVRMRVFKQLCYECGTARLDESSMLEENIESLVDNLITSLREQCYGERGGQYRIHVASRRDTRRHRGEFCEACQEGIVHWKPSEKLLEEEAATYTFSRAPSPAKPQAEEGSGCNFFSIPWCLFWATVLLLIIYLQFSFRSSV