Details from NCBI annotation

Gene Symbol Cldn1
Gene Name claudin 1
Entrez Gene ID 101709404

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLDN1 ENSCPOG00000010741 (Guinea pig)

Gene Details

claudin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009643, Guinea pig)

Protein Percentage 86.26%
CDS Percentage 86.57%
Ka/Ks Ratio 0.13974 (Ka = 0.0703, Ks = 0.5032)

CLDN1 ENSG00000163347 (Human)

Gene Details

claudin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000295522, Human)

Protein Percentage 91.47%
CDS Percentage 90.84%
Ka/Ks Ratio 0.15511 (Ka = 0.0438, Ks = 0.2826)

Cldn1 ENSMUSG00000022512 (Mouse)

Gene Details

claudin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023154, Mouse)

Protein Percentage 89.57%
CDS Percentage 87.99%
Ka/Ks Ratio 0.12346 (Ka = 0.0518, Ks = 0.4195)

Cldn1 ENSRNOG00000001926 (Rat)

Gene Details

claudin 1 (Cldn1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002640, Rat)

Protein Percentage 90.52%
CDS Percentage 87.2%
Ka/Ks Ratio 0.09534 (Ka = 0.047, Ks = 0.4929)

Genome Location

Sequence Coding sequence

Length: 636 bp    Location: 66885645..66900307   Strand: +
>XM_004834786.1
ATGGCCAACGCCGGGCTGCAGCTGCTGGGCTTCATCCTGGGCTTCCTAGGCTGGATCGGCTCCATCGTCAGCACCGCCCTGCCCCAGTGGAAGATTTACTCCTATGCCAGCGACAACATTGTGACCGCCCAGGCCATCTACGAGGGGCTGTGGATGTCCTGCGTGTCGCAGAGCACGGGGCAGATCCAGTGCAAAGTCTTCGACTCCTTGCTCAATCTGCACAGCACTTTACAAGCAACCCGCGCCTTGATGATAATCGGCATCTTGCTGGGACTGATCGCAATCTTTGTGTCCACCATCGGGATGAAGTGTATGAAGTGCTTGGAAGATGACGAGGTGCAGAAGATGCGGATGGCTGTCATTGGGGGCGTGATATTTCTTCTTGCAGGTCTGGCTATTTTAGTCGCCACAGCATGGTATGGCAATAGAATTGTTCAAGAATTTTACAACCCTATGACCCCCGTCAATGCCAGGTATGAGTTTGGTCAGGCTCTCTTCACTGGTTGGGCTGCTGCCTCTCTCTGCCTCCTGGGAGGTGCCCTACTTTGCTGTTGCTGTCCCCAAAAAGCAACCTCTTACCCAACACCAAGGCCTTATCCAAAAACAGCACCTTCCACTGGGAAAGACTATGTGTGA

Related Sequences

XP_004834843.1 Protein

Cldn1 PREDICTED: claudin-1 [Heterocephalus glaber]

Length: 211 aa      View alignments
>XP_004834843.1
MANAGLQLLGFILGFLGWIGSIVSTALPQWKIYSYASDNIVTAQAIYEGLWMSCVSQSTGQIQCKVFDSLLNLHSTLQATRALMIIGILLGLIAIFVSTIGMKCMKCLEDDEVQKMRMAVIGGVIFLLAGLAILVATAWYGNRIVQEFYNPMTPVNARYEFGQALFTGWAAASLCLLGGALLCCCCPQKATSYPTPRPYPKTAPSTGKDYV