Details from NCBI annotation

Gene Symbol Ccdc50
Gene Name coiled-coil domain containing 50, transcript variant X3
Entrez Gene ID 101704004

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC50 ENSCPOG00000013365 (Guinea pig)

Gene Details

coiled-coil domain containing 50

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012032, Guinea pig)

Protein Percentage 87.5%
CDS Percentage 89.58%
Ka/Ks Ratio 0.27108 (Ka = 0.071, Ks = 0.2618)

CCDC50 ENSG00000152492 (Human)

Gene Details

coiled-coil domain containing 50

External Links

Gene Match (Ensembl Protein ID: ENSP00000376250, Human)

Protein Percentage 84.59%
CDS Percentage 87.43%
Ka/Ks Ratio 0.23713 (Ka = 0.0836, Ks = 0.3525)

Ccdc50 ENSMUSG00000038127 (Mouse)

Gene Details

coiled-coil domain containing 50

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000097604, Mouse)

Protein Percentage 83.22%
CDS Percentage 82.13%
Ka/Ks Ratio 0.12339 (Ka = 0.101, Ks = 0.8187)

Ccdc50 ENSRNOG00000001930 (Rat)

Gene Details

coiled-coil domain containing 50 (Ccdc50), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002649, Rat)

Protein Percentage 81.58%
CDS Percentage 82.13%
Ka/Ks Ratio 0.15013 (Ka = 0.1117, Ks = 0.7438)

Genome Location

Sequence Coding sequence

Length: 918 bp    Location: 65949147..65883156   Strand: -
>XM_004834775.1
ATGGCTGAAGTCGGCATCGACCAGTCCAAGCTGCCCGGCGTGAAGGAAGTATGCCGAGACTTTGCTGTCCTGGAGGACCACACCCTGGCTCAGAATCTGCAGGAACAAGAGATTGAACATCATTTGGCATCAAACATTCAGAGGAACCGTTTGGTCCAGCATGATCTCCAGGTGGCTAAACAGCTCCAGGAAGAAGATCTGAAAGCCCAGGCTCAGCTCCAGAAGCGCTACAAAGACCTGGAACAACAAGACTGTGAAATTGCTCAGGAAATTCAGGAGAAGCTGGCGATTGAGGCTGAGAGACGGCGTATTCAGGAGAAGAAGGATGAGGACATAGCTCGCCTTTTACAAGAAAGGGAGTTGCAAGAAGAAAAAAAGCGAAAGAAATATGTTCCAGAATTCTCTGGTGCCAATGTTTTTGGAGAGAGTTATTATTATGAAGATAGAGGAACAAAACCGAGGATGACGAAAGAAGCTGTGTGCACTCTCTCACGAGTGACCCACAGAGATCAGGAGTGGTATGATGCTGAAATTGCCAGAAAACTGCAAGAAGAGGAAATTTTGGCTACCCAAGAGGACATGAGAGCAGCCCAAGTAGCCCAGGATGAGGAAATTGCTCGACTTCTAATGGCTGAAGAAAAGAAAGCTTACAAGAAAGCCAAAGAGCGAGAGAAGACATCTTCAGACAAAAAGCATGACCCCGAGTGGAAGTCAAAAACTGCTAAATCAGCACACTCCAAATCACAAGAAAGTGATGAGGCTCACCGTTGGAAGACCGACAGGCCAGGACGGCTGCCACCACCTGTCATGACAGAAGCTGAGGATCTGGATGGCACTCACTTTACAAACCAGCATAGTTCTACACGTCATTATTCAAAATCAGAGTCCTCTCATAAAGGTTTCCATTACAAGCAGTAA

Related Sequences

XP_004834832.1 Protein

Ccdc50 PREDICTED: coiled-coil domain-containing protein 50 isoform X3 [Heterocephalus glaber]

Length: 305 aa      View alignments
>XP_004834832.1
MAEVGIDQSKLPGVKEVCRDFAVLEDHTLAQNLQEQEIEHHLASNIQRNRLVQHDLQVAKQLQEEDLKAQAQLQKRYKDLEQQDCEIAQEIQEKLAIEAERRRIQEKKDEDIARLLQERELQEEKKRKKYVPEFSGANVFGESYYYEDRGTKPRMTKEAVCTLSRVTHRDQEWYDAEIARKLQEEEILATQEDMRAAQVAQDEEIARLLMAEEKKAYKKAKEREKTSSDKKHDPEWKSKTAKSAHSKSQESDEAHRWKTDRPGRLPPPVMTEAEDLDGTHFTNQHSSTRHYSKSESSHKGFHYKQ