Details from NCBI annotation

Gene Symbol Ccdc39
Gene Name coiled-coil domain containing 39, transcript variant X2
Entrez Gene ID 101720210

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC39 ENSCPOG00000015314 (Guinea pig)

Gene Details

coiled-coil domain containing 39

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013800, Guinea pig)

Protein Percentage 89.2%
CDS Percentage 91.82%
Ka/Ks Ratio 0.21165 (Ka = 0.0517, Ks = 0.2443)

CCDC39 ENSG00000145075 (Human)

Gene Details

coiled-coil domain containing 39

External Links

Gene Match (Ensembl Protein ID: ENSP00000405708, Human)

Protein Percentage 84.2%
CDS Percentage 87.55%
Ka/Ks Ratio 0.22168 (Ka = 0.0864, Ks = 0.3899)

Ccdc39 ENSMUSG00000027676 (Mouse)

Gene Details

coiled-coil domain containing 39

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029222, Mouse)

Protein Percentage 74.47%
CDS Percentage 77.56%
Ka/Ks Ratio 0.1697 (Ka = 0.17, Ks = 1.0017)

Ccdc39 ENSRNOG00000011440 (Rat)

Gene Details

coiled-coil domain containing 39 (Ccdc39), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061948, Rat)

Protein Percentage 74.11%
CDS Percentage 77.38%
Ka/Ks Ratio 0.18741 (Ka = 0.1798, Ks = 0.9591)

Genome Location

Sequence Coding sequence

Length: 2814 bp    Location: 58471852..58436015   Strand: -
>XM_004834649.1
ATGAGTAGAGAGTTCCTGGCGGAGCTGCATTGGGAGGATGGGTTTGCCCTCCCAGTGTCAAACGAAGGGAACAAAATGCTGGAAAATCAGTTATCAAAGCTGCAGAATGAAAAATCAAACTTGGAAGATCAGCTACATGATTACGAGGATCGAATTAATGCTATGAATTCTCACTTCAAAAATGTTAAGCAAGAATTCTCATTTACACAGTCTCTTTACAAAGCAAAGGAGAATGAGATTGAAAGTGAAGAACATTTTAAGGCCATTGCCGAAAGAGAATTGGGACGAGTGAAGAGTGAAATACTAAGACTAGAAAATGAGATCGTTTCCATACGAGAACGGAAAACTGACAAGGAAAATGGCATATTTAAAGCAACTCAAAAGTTGGATGGTTTGAAATGTCAAATGAACTGGGACCAGCAAGCATTGGAGGCCTGGCTAGAAGAATCAGCTCATAAAGATAGTGATGCCTTCACTCTTCAGAAATATGCACAACAAGATGATAATAAAATTAGGGCACTGACCCTGAAGTTAGAAAGACTGACCTTGGAATGTAATCAGAAGAGAAAGGTTCTTGACAACGAACTTACAGAGACTCTAAGTGCCCAGTTAGAATTGGATAAAGCAGCACAAGATTTTCAGAAGATTCATAATGAAAGACAAGAACTCATTGAACAGTGGGAGAACACAATAGAACAGATGCAGAAGAGGGATCGAGACATAGATGACTGTGCCTTGGCATTAACAAGGATAAAACAGGAAACAAGAGAAAAAGAAAGTTTGGTTAAAGAAAAGGTCAAGTTTTTGGAAAATGAAATTGGGAATAACACAGAGTATGAGAAAAGGATTTCTGCTGCTGACCGTGAAGTTTTAAAATGTAGAACAGAATATCAAAATCATGAATCCAGTAGAAGTCAGCTGAAGGATGAGCTGGATTCTTTAAAAGCCACTGTAAATAGAACTTCCAGTGATTTGGAAGCTTTGAGGAAAAATATTTCCAAAATAAAGAAGGACAGTCATGAAGAAAGACAAAGGTTACAAAAAATTAAAAATCATAATCAGATCATTAGCAAAAAATTAAATCATATAACTGAGAAAACCATGTCTGTGGAAGAGAAGGCCACCAATTTGGAAGATATGCTAAAAGAACAGGAAAAGGGTGTAAAGGAAGTGGAAGTTCGATTGAACATAGTGAAAGATGTGCTGTTTAAGAAAGTTCAGGAGTTACAGACTGAGATGATGAAAGAAAAAGCTGTTGTATCAGAAATTGAAGGAACCCGTTCCACTCTGAAACATCTCAACAATCAGTTACATAAACTGGATTTTGAAACCTTAAAACAGCAAGAAATTATGTACAGTCAGGACTTTTACATTCAACAAGTGGAACGAAGAATGTCACAGTTAAAGGGAGAAATTAATTCAGAAGAAAAACAAGCTCTGGAAGCAAAAATTGTTGAATTTAAGAAGTCTTTGGAAGAAAAAAAGTCTACATTTGACCTTTTGGAAACACAGATCAAGAAACTTCATAATGATCTTTACTTTATCAAGAAGTCGAACAGTAAAAATTGTGATGAAAAACAGTCCCTTTTGACCAAAATAAATGAATTAAACCTTTTTATCAACAGCTCAGAGAAAGAACTCAACAAAGCCAAAGTTTTTAAACAGGATTTGATGATAGAGGATAATCTTTTAAAACTTGAGGTTAAACGTACTCGAGAAATGCTTCACAGTAAGGCAGAAGAAGTTCTTTCCCTGGAAAAAAGAAAACAGCAGTTACTTACAGCTATGGAAGAGCGAACCGAAGAAATTAAGGTGCACAAAATGATGCTTGCCTCACAAATAAGATATGTTGATCAAGAAAGGCAAAACATAAGTGGGGAGTTCCATGAACGACTCAGTAAAATTGATAAGCTGAAAAATAGATATGAAATTCTTACTGTTGTTATGCTGCCTCCTGAAGGTGAAGAGGAGAAAACACAGGCCTATTATGTAATAAAGGCTGCTCAAGAAAAAGAAGAACTTCAAAGGGAAGGTGACAGTTTGGATGCTAAGATTAACAAAGCTGAAAAAGAAATCTATGCTCTAGGAAATACCTTGCAAGTCCTGAACAGCTGCAACAGAAATTACAAACATTCTTTTAAAAAAGTGACTCCATCTAGTGATGAGTATCAGCTAAAAATTCAACTAGAAGAACAAAGAAGAGCTGCTGATGAAAAATACAGATATAAACAGAGACAAATTAGAGAACTTCAAGAAGACATCCAGAGCATGGAAAACACTTTACAACTTACAGAACATTTAGCAAATAATGTCAAAGAAAAACTATCAGAGAAACAAGCTTTTGCATCTCAAGTACATAGAGAAACTGAAGAGCAGAAGCCAAAATTAGAGAGAGTGACTAAACAGTGTGCAAAACTCACAAAAGATATCCGTCTTTTGAAACAAACAAAAGATGAAACACCAGAAGAACAAGACATTAAAGTCCGTGAAGTGAAGCAATTTCAAAAGGTCATTGATGAAATGTTAGTTGATTGTATAAAAGAAAATGCTGCAATCCGTTTTATCCTTCAAACATATTTTAAGCAGAATGGGTTAGAGCTACCAATAGCTAGTAGTAAAGAGAGCCACCAGAGTTCTACATCTTCACAGGCCTCACTGGTATCACCAAGTAGCATAAATACTTCTGCTTCTCAGGCTTCGATTAAAGTATTAGAGCTCAACTTCCCAGACTCTTCACCAGTAGGCAGTAATTCTAGGCCAATCAGAGCTAGCAGTAGTTCTAGTAATTTGAAAAGCAACAAGAGTGGCAAATAA

Related Sequences

XP_004834706.1 Protein

Ccdc39 PREDICTED: coiled-coil domain-containing protein 39 isoform X2 [Heterocephalus glaber]

Length: 937 aa      View alignments
>XP_004834706.1
MSREFLAELHWEDGFALPVSNEGNKMLENQLSKLQNEKSNLEDQLHDYEDRINAMNSHFKNVKQEFSFTQSLYKAKENEIESEEHFKAIAERELGRVKSEILRLENEIVSIRERKTDKENGIFKATQKLDGLKCQMNWDQQALEAWLEESAHKDSDAFTLQKYAQQDDNKIRALTLKLERLTLECNQKRKVLDNELTETLSAQLELDKAAQDFQKIHNERQELIEQWENTIEQMQKRDRDIDDCALALTRIKQETREKESLVKEKVKFLENEIGNNTEYEKRISAADREVLKCRTEYQNHESSRSQLKDELDSLKATVNRTSSDLEALRKNISKIKKDSHEERQRLQKIKNHNQIISKKLNHITEKTMSVEEKATNLEDMLKEQEKGVKEVEVRLNIVKDVLFKKVQELQTEMMKEKAVVSEIEGTRSTLKHLNNQLHKLDFETLKQQEIMYSQDFYIQQVERRMSQLKGEINSEEKQALEAKIVEFKKSLEEKKSTFDLLETQIKKLHNDLYFIKKSNSKNCDEKQSLLTKINELNLFINSSEKELNKAKVFKQDLMIEDNLLKLEVKRTREMLHSKAEEVLSLEKRKQQLLTAMEERTEEIKVHKMMLASQIRYVDQERQNISGEFHERLSKIDKLKNRYEILTVVMLPPEGEEEKTQAYYVIKAAQEKEELQREGDSLDAKINKAEKEIYALGNTLQVLNSCNRNYKHSFKKVTPSSDEYQLKIQLEEQRRAADEKYRYKQRQIRELQEDIQSMENTLQLTEHLANNVKEKLSEKQAFASQVHRETEEQKPKLERVTKQCAKLTKDIRLLKQTKDETPEEQDIKVREVKQFQKVIDEMLVDCIKENAAIRFILQTYFKQNGLELPIASSKESHQSSTSSQASLVSPSSINTSASQASIKVLELNFPDSSPVGSNSRPIRASSSSSNLKSNKSGK