Details from NCBI annotation

Gene Symbol Slitrk3
Gene Name SLIT and NTRK-like family, member 3, transcript variant X2
Entrez Gene ID 101712288

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLITRK3 ENSCPOG00000005080 (Guinea pig)

Gene Details

SLIT and NTRK-like family, member 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004568, Guinea pig)

Protein Percentage 95.97%
CDS Percentage 91.19%
Ka/Ks Ratio 0.06672 (Ka = 0.0224, Ks = 0.3361)

SLITRK3 ENSG00000121871 (Human)

Gene Details

SLIT and NTRK-like family, member 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000420091, Human)

Protein Percentage 96.83%
CDS Percentage 91.98%
Ka/Ks Ratio 0.05315 (Ka = 0.0158, Ks = 0.2968)

Slitrk3 ENSMUSG00000048304 (Mouse)

Gene Details

SLIT and NTRK-like family, member 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000088561, Mouse)

Protein Percentage 95.71%
CDS Percentage 88.74%
Ka/Ks Ratio 0.04784 (Ka = 0.0232, Ks = 0.4842)

Slitrk3 ENSRNOG00000009821 (Rat)

Gene Details

SLIT and NTRK-like family, member 3 (Slitrk3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013009, Rat)

Protein Percentage 95.71%
CDS Percentage 89.1%
Ka/Ks Ratio 0.04611 (Ka = 0.0217, Ks = 0.4698)

Genome Location

Sequence Coding sequence

Length: 2943 bp    Location: 43191531..43181818   Strand: -
>XM_004834546.1
ATGATGAAACCTTCCATAGCTGAGATGCTTCACAGAGGGAGGATGTTGTGGATAATTCTTCTAAGCACAATTGCTCTAGGATGGACTACCCCCATTCCCCTGATAGAGGACTCAGAGGAAATAGATGAGCCCTGTTTTGATCCATGCTACTGTGAAGTTAAAGAAAGCCTCTTTCATATACATTGTGACAGTAAAGGATTTACAAATATTAGTCAGATTACTGAATTTTGGTCAAGACCTTTTAAACTGTATCTGCAGAGGAATTCAATGAGGAAATTATACACCAACAGTTTTCTTCATTTGAATAATGCTGTGTCCATTAACCTTGGGAACAATGCTTTGCAGGACATTCAAATGGGAGCTTTTAATGGTCTTAAGATCTTAAAGAGGCTATACCTACATGAGAATAAACTAGATGTCTTCAGAAATGACACCTTCCTTGGCTTGGAAAGTCTAGAATATCTGCAGGCAGATTACAATGTCATTAAACGTATTGAGAGTGGAGCATTTCGGAACCTAAGTAAATTGAGGGTTCTGATTTTAAATGATAATCTCATCCCCATGCTTCCCACCAATTTATTTAAGGCTGTTTCTTTAACCCATTTGGACTTACGTGGAAACAGGTTAAAGGTTCTTTTTTACCGAGGAATGCTAGATCACATTGGCAGAAGCCTAATGGAGCTCCAACTAGAAGAAAATCCCTGGAACTGTACCTGTGAAATTGTGCAGCTGAAGAGCTGGCTGGAACGCATTCCTTACACTGCCCTGGTGGGAGACATCACCTGTGAGACACCTTTCCATTTCCATGGAAAGGACCTGCGAGAAATCAGGAAGACAGAACTCTGCCCCTTGTTGTCTGACTCTGAGGTGGAAGCTAGTTTGGGGATACCTCATTTGTCATCAAGCAAGGAGAATGCATGGCCAACTAAACCTTCCTCCATGCTGTCCTCTGTCCATTTTACTGCTTCTTCTGTTGAATACAAGTCCTCAAATAAACAGCCCAAGCCCACCAAACAGCCCCGAACACCAAGACCACCCTCTACATCCCAAGCTTTATATCCTGGTCCAAATCAACCTCCTATTGCTCCTTACCAGACCAGACCACCAATTCCTATCATATGCCCTACTGGGTGTACTTGTAATTTGCACATCAATGACCTTGGCTTGACTGTCAATTGCAAAGAGCGAGGATTTAATAACATTTCTGAACTTCTTCCAAGGCCACTGAATGCCAAAAAACTGTACCTGAGTAGCAATCTGATTCAGAAAATATACCGCTCAGATTTTTGGAATTTTTCTTCTTTGGATCTCTTACATCTGGGGAACAACCGCATTTCTTATGTCCAGGATGGGGCCTTCATCAACCTGCCTAACTTAAAAAGTCTGTTTCTCAATGGCAATGATATAGAGAAGCTGACACCTGGCATGTTCCGAGGGCTACAGAGTTTGCACTACTTGTACTTTGAGTTCAACGTCATCCGGGAAATTCAGCCTGCAGCTTTTAGCCTCATGCCCAACTTGAAGCTGCTATTCCTCAACAATAACTTGCTGAGGACTCTGCCGACAGACGCCTTTGCAGGCACATCCCTGGCTCGGCTCAACTTGAGAAAGAACTATTTCCTCTATCTTCCTGTGGCTGGTGTGCTGGAACACTTGAATGCCATTGTGCAGATAGACCTCAACGAGAATCCCTGGGACTGCACTTGTGACCTGGTCCCCTTTAAGCAGTGGATCGAAACCATCAGCTCAGTCAGTGTGGTAGGAGATGTGCTTTGTAGGAGCCCTGAGAACCTCACACACCGTGATGTCCGCACCATCGAACTGGAAGTGTTATGTCCAGAGATGCTGCATATTGCACCCACTGGCGCATCCCCAGCCCACTCTGGAGATTCTCACTTTGTTGGGAGCCCAACGAGTGTATCACCTTATGAGTTATCTCCTCCCGGGGTCCCTGTGCCACTTTCTGTGTTGATCCTCAGCCTGCTGGTTCTGTTCTTTTCTGCAGTCTTTGTTGCTGCAGGCCTCTTTGCCTACGTGCTCCGACGGCGTCGGAAGAAGCTGCCCTTTCGAAGTAAGCGGCAAGAAGGTGTAGACCTCACCGGCATCCAGATGCAGTGCCACCGGCTGTTTGAGGATGGTGGAGGTGGTGGTGGTGGAAGCGCGGGTGGAGGCCGACCAACTCTTTCTTCCCCTGAGAAGGCTCCTCCTGTGGGTCACGTGTACGAGTACATCCCCCACCCGGTTACCCAGATGTGCAACAACCCCATCTACAAGCCTCGTGAGGAGGAAGAAGTGGTTGCTTCAGCAGGGCAGGACACAGGAAGTGCAGAACGTGGGGGTCCTGGGACACAGGCGCCGGGAATGGGCGAGGTTCTCCTAGGAAGTGAGCAGTTTGCGGAGACACCGAAGGAGACCCACAGCAACTACCGGACTTTGCTGGAGAAAGAGAAGGAGTGGGCCCTGGCGGTTTCCAGCTCCCAGCTCAACACCATAGTGACGGTGAATCACCACCACCCTCACCCACACCACTCTGCAGTTGGTGGGGTTCCAGGGGTCGTTGGGGGAGCTGGGGGAGACTTGTCTGGGTTCCGCCACCATGAGAAGAATGGTGGGGTGGTGCTGTTCCCCCCCGGGGGAGGCTGTGGTGGTGGCAGTATGCTACTTGACCGGGAGAGACCACAGCCGGGCCCCTGCGCAGTCGGCTTCGTGGACTGTCTCTACGGCACAGTGCCCAAATTAAAGGAACTACATGTCCACCCCCCCGGCATGCAATACCCAGACTTACAGCAGGATGCCAGGCTCAAAGAAACCCTTCTCTTCTCAGCTGGAAAGGGCTTCACAGACCACCAAACCCAAAAAAGTGATTACCTCGAGTTAAGGGCCAAACTTCAAACAAAGCCGGATTACCTCGAAGTCCTGGAAAAAACATCGTATAGGTTCTAA

Related Sequences

XP_004834603.1 Protein

Slitrk3 PREDICTED: SLIT and NTRK-like protein 3 isoform X2 [Heterocephalus glaber]

Length: 980 aa      View alignments
>XP_004834603.1
MMKPSIAEMLHRGRMLWIILLSTIALGWTTPIPLIEDSEEIDEPCFDPCYCEVKESLFHIHCDSKGFTNISQITEFWSRPFKLYLQRNSMRKLYTNSFLHLNNAVSINLGNNALQDIQMGAFNGLKILKRLYLHENKLDVFRNDTFLGLESLEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAVSLTHLDLRGNRLKVLFYRGMLDHIGRSLMELQLEENPWNCTCEIVQLKSWLERIPYTALVGDITCETPFHFHGKDLREIRKTELCPLLSDSEVEASLGIPHLSSSKENAWPTKPSSMLSSVHFTASSVEYKSSNKQPKPTKQPRTPRPPSTSQALYPGPNQPPIAPYQTRPPIPIICPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQKIYRSDFWNFSSLDLLHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFNVIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGTSLARLNLRKNYFLYLPVAGVLEHLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRSPENLTHRDVRTIELEVLCPEMLHIAPTGASPAHSGDSHFVGSPTSVSPYELSPPGVPVPLSVLILSLLVLFFSAVFVAAGLFAYVLRRRRKKLPFRSKRQEGVDLTGIQMQCHRLFEDGGGGGGGSAGGGRPTLSSPEKAPPVGHVYEYIPHPVTQMCNNPIYKPREEEEVVASAGQDTGSAERGGPGTQAPGMGEVLLGSEQFAETPKETHSNYRTLLEKEKEWALAVSSSQLNTIVTVNHHHPHPHHSAVGGVPGVVGGAGGDLSGFRHHEKNGGVVLFPPGGGCGGGSMLLDRERPQPGPCAVGFVDCLYGTVPKLKELHVHPPGMQYPDLQQDARLKETLLFSAGKGFTDHQTQKSDYLELRAKLQTKPDYLEVLEKTSYRF