Details from NCBI annotation

Gene Symbol Sptssb
Gene Name serine palmitoyltransferase, small subunit B
Entrez Gene ID 101708568

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SPTSSB ENSCPOG00000007246 (Guinea pig)

Gene Details

serine palmitoyltransferase, small subunit B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015840, Guinea pig)

Protein Percentage 90.79%
CDS Percentage 90.79%
Ka/Ks Ratio 0.18757 (Ka = 0.0486, Ks = 0.2592)

SPTSSB ENSG00000196542 (Human)

Gene Details

serine palmitoyltransferase, small subunit B

External Links

Gene Match (Ensembl Protein ID: ENSP00000352097, Human)

Protein Percentage 89.47%
CDS Percentage 88.6%
Ka/Ks Ratio 0.14834 (Ka = 0.0555, Ks = 0.3744)

Sptssb ENSMUSG00000043461 (Mouse)

Gene Details

serine palmitoyltransferase, small subunit B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000131241, Mouse)

Protein Percentage 88.16%
CDS Percentage 83.77%
Ka/Ks Ratio 0.05638 (Ka = 0.0591, Ks = 1.0483)

Sptssb ENSRNOG00000009388 (Rat)

Gene Details

serine palmitoyltransferase, small subunit B (Sptssb), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012422, Rat)

Protein Percentage 88.16%
CDS Percentage 86.4%
Ka/Ks Ratio 0.10367 (Ka = 0.0597, Ks = 0.5755)

Genome Location

Sequence Coding sequence

Length: 237 bp    Location: 39323139..39291652   Strand: -
>XM_004834543.1
ATGAGCATGGATTTCAGGCGTGTGAAAGAATATTTCTCTTGGCTCTACTATCAATACCAAATCATTACATGTTGTGCTGTCATGGAGCCCTGGGAGCAATCTATGTTCAATACTGTTGTGCTAACCATTTTTGCCATGGTGGTGTACACTGCCTACATCTTCATCCCAATCCACATTCGCCTGGCTTGGGAATTTTTCTCAAAAATATGTGGATATCACAGTACAATTTCCAACTGA

Related Sequences

XP_004834600.1 Protein

Sptssb PREDICTED: serine palmitoyltransferase small subunit B [Heterocephalus glaber]

Length: 78 aa      View alignments
>XP_004834600.1
MSMDFRRVKEYFSWLYYQYQIITCCAVMEPWEQSMFNTVVLTIFAMVVYTAYIFIPIHIRLAWEFFSKICGYHSTISN