Details from NCBI annotation

Gene Symbol Schip1
Gene Name schwannomin interacting protein 1, transcript variant X5
Entrez Gene ID 101699238

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IQCJ-SCHIP1 ENSCPOG00000003961 (Guinea pig)

Gene Details

IQCJ-SCHIP1 readthrough

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003577, Guinea pig)

Protein Percentage 92.69%
CDS Percentage 93.38%
Ka/Ks Ratio 0.19659 (Ka = 0.0372, Ks = 0.1894)

IQCJ-SCHIP1 ENSG00000250588 (Human)

Gene Details

IQCJ-SCHIP1 readthrough

External Links

Gene Match (Ensembl Protein ID: ENSP00000420182, Human)

Protein Percentage 93.39%
CDS Percentage 92.54%
Ka/Ks Ratio 0.12138 (Ka = 0.0318, Ks = 0.2617)

Schip1 ENSMUSG00000027777 (Mouse)

Gene Details

schwannomin interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029346, Mouse)

Protein Percentage 92.11%
CDS Percentage 88.2%
Ka/Ks Ratio 0.07976 (Ka = 0.0414, Ks = 0.5186)

Schip1 ENSRNOG00000009276 (Rat)

Gene Details

schwannomin interacting protein 1 (Schip1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000054283, Rat)

Protein Percentage 90.83%
CDS Percentage 87.56%
Ka/Ks Ratio 0.08075 (Ka = 0.0452, Ks = 0.5602)

Genome Location

Sequence Coding sequence

Length: 1410 bp    Location: 37554526..37687358   Strand: +
>XM_004834526.1
ATGCCTGGAGGATTCAGCCGAGACTACCGAGAGGATGGGATGGATCTAGGCAGTGACGCCGGCAGTAGCAGCAGCAGCCGCGCCAGTTCGCAGTCCAACTCCACTAAAGTGACCCCTTGCTCCGAGTGCAAATCCTCGTCGTCGCCGGGGGGCAGCCTGGACTTGGTGTCTGCCCTGGAGGACTATGAGGAGCCTTTTCTGGTCTACCAGAAGAAGGAGATTGATGAATGGGCGCCGGAGGAGGACGGGGAGGAAGAGGAAGAGGAAGACGAGCGAGGGTACCGGGATGACCGGTGTCCGGCTCGGGAGCCAGGGAACGTGAGCGCCAGGACCGGGGGCGGCGGGGGCAGGAGCAGCACCACCACCACGACCATGCCGCCCCCGATGCCCAACGGCAACCTCCACCCGCAAGCCCCCCAGGACCTCAGGCACAATGGCAATGTGGTGGTGGCCGGCCGGCCGAGCGGTTCCCGGGGTCCTCGGCGAACGATCCAGAAGCCCAAGCCGGCGGGTAGCCGGCACGGCGGCCGGGGCCCGGCAGCCGGGTGGCTCTGCCTCCAACCCCCGGACGGCGGGACTTGCGTCCTAGAAGAGCCCCCAGTACCCCCTATGGACTGGGAGGCGCTGGAGAAGCATCTGGCCGGGCTGCAGTTCCGGGAGCAGGAGGTGCGAAACCAGGGCCAGGCGAGGACCAACTCCACCTCCGCACAGAAAAATGAGAGAGAGTCTATCAGACAGAAGTTGGCACTTGGAAGCTTCTTTGATGATGGCCCAGGAATTTATACCAGCTGTAGCAAAAGTGGGAAGCCAAGTCTTTCCTCTCGATTGCAGAGCGGGATGAACCTGCAGATATGCTTTGTCAATGACAGTGGCAGTGATAAGGACAGTGATGCTGATGACAGTAAGACTGAAACCAGCTTGGACACTCCCTTGTCACCCATGAGCAAACAGAGTTCTTCCTATTCTGACAGAGATACCACTGAAGAAGAGTCTGAATCCTTGGATGACATGGACTTCCTCACAAGGCAAAAGAAATTGCAAGCTGAAGCCAAGATGGCCCTTGCCATGGCCAAACCAATGGCCAAAATGCAAGTAGAAGTGGAAAAACAGAACAGGAAAAAGTCTCCCGTCGCTGATCTTCTGCCACATATGCCTCATATAAGTGAATGTTTGATGAAAAGAAGTTTAAAACCCACCGACTTGAGAGACATGACTATTGGGCAGCTACAAGTGATAGTCAATGATCTCCATTCCCAGATCGAAAGCTTGAATGAAGAGTTGGTCCAGCTGCTTCTCATCCGTGATGAGCTGCACACAGAGCAGGATGCGATGCTGGTAGACATCGAAGACTTGACCAGACATGCTGAAAGTCAGCAGAAGCACATGGCAGAGAAAATGCCTGCAAAGTGA

Related Sequences

XP_004834583.1 Protein

Schip1 PREDICTED: schwannomin-interacting protein 1 isoform X5 [Heterocephalus glaber]

Length: 469 aa      View alignments
>XP_004834583.1
MPGGFSRDYREDGMDLGSDAGSSSSSRASSQSNSTKVTPCSECKSSSSPGGSLDLVSALEDYEEPFLVYQKKEIDEWAPEEDGEEEEEEDERGYRDDRCPAREPGNVSARTGGGGGRSSTTTTTMPPPMPNGNLHPQAPQDLRHNGNVVVAGRPSGSRGPRRTIQKPKPAGSRHGGRGPAAGWLCLQPPDGGTCVLEEPPVPPMDWEALEKHLAGLQFREQEVRNQGQARTNSTSAQKNERESIRQKLALGSFFDDGPGIYTSCSKSGKPSLSSRLQSGMNLQICFVNDSGSDKDSDADDSKTETSLDTPLSPMSKQSSSYSDRDTTEEESESLDDMDFLTRQKKLQAEAKMALAMAKPMAKMQVEVEKQNRKKSPVADLLPHMPHISECLMKRSLKPTDLRDMTIGQLQVIVNDLHSQIESLNEELVQLLLIRDELHTEQDAMLVDIEDLTRHAESQQKHMAEKMPAK