Details from NCBI annotation

Gene Symbol Shox2
Gene Name short stature homeobox 2, transcript variant X1
Entrez Gene ID 101725435

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SHOX2 ENSCPOG00000006288 (Guinea pig)

Gene Details

short stature homeobox 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005668, Guinea pig)

Protein Percentage 99.4%
CDS Percentage 95.67%
Ka/Ks Ratio 0.01601 (Ka = 0.0028, Ks = 0.1752)

SHOX2 ENSG00000168779 (Human)

Gene Details

short stature homeobox 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000374240, Human)

Protein Percentage 98.49%
CDS Percentage 93.25%
Ka/Ks Ratio 0.02328 (Ka = 0.0069, Ks = 0.2975)

Shox2 ENSMUSG00000027833 (Mouse)

Gene Details

short stature homeobox 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029422, Mouse)

Protein Percentage 98.79%
CDS Percentage 92.83%
Ka/Ks Ratio 0.01783 (Ka = 0.0056, Ks = 0.3164)

Shox2 ENSRNOG00000012478 (Rat)

Gene Details

short stature homeobox 2 (Shox2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016843, Rat)

Protein Percentage 100.0%
CDS Percentage 93.71%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.2939)

Genome Location

Sequence Coding sequence

Length: 996 bp    Location: 35835756..35825922   Strand: -
>XM_004834511.1
ATGGAAGAACTTACGGCGTTCGTCTCCAAGTCTTTTGACCAGAAAGTGAAGGAGAAGAAGGAGGCCATCACGTACCGGGAGGTGCTGGAAAGCGGGCCACTGCGCGGAGCCAAGGAGCCAAGCGGCTGCGCTGAGCCGGGCCGAGACGACCGCAGCAGCCCCGCAGTCCGGGCGGCCGGCGGAGGCGGCGGCGGCGGAGGAGGCGGAGGCGGAGGAGGCGGAGGAGGTGCAGGAGGAGGAGGAGGAGCAGGCGGAGGAGCTGGAGGAGGGCGCTCTCCCGTCCGGGAGCTGGACATGGGCGCCGCGGAGAGGAGCAGAGAGCCCGGCAGCCCGCGGCTTACCGAGGTGTCCCCCGAGTTGAAGGATCGCAAAGAGGATGCGAAAGGGATGGAGGACGAAGGCCAGACCAAAATCAAGCAGAGACGAAGTCGGACCAATTTCACCCTGGAACAACTCAATGAGCTGGAGAGGCTTTTTGACGAGACCCACTATCCGGACGCCTTCATGCGCGAGGAACTGAGCCAGAGACTGGGGCTCTCAGAGGCCCGAGTGCAGGTTTGGTTTCAAAATCGAAGAGCTAAGTGTAGAAAACAAGAAAATCAACTCCATAAAGGTGTTCTTATAGGGGCGGCTAGCCAATTTGAAGCTTGTAGAGTTGCACCCTATGTTAATGTAGGTGCTTTAAGGATGCCATTTCAGCAGGATAGTCATTGCAACGTGACGCCCTTGTCCTTTCAGGTTCAGGCGCAGCTGCAGCTGGACAGCGCCGTGGCGCACGCGCACCACCACCTGCATCCGCACCTGGCCGCGCACGCGCCCTATATGATGTTCCCGGCGCCTCCCTTCGGACTGCCGCTTGCCACTCTGGCCGCGGACTCGGCCTCCGCCGCTTCAGTAGTGGCTGCGGCAGCCGCTGCCAAAACCACCAGCAAGAACTCCAGCATCGCCGATCTCAGACTGAAAGCCAAAAAGCACGCGGCCGCCTTGGGTCTGTGA

Related Sequences

XP_004834568.1 Protein

Shox2 PREDICTED: short stature homeobox protein 2 isoform X1 [Heterocephalus glaber]

Length: 331 aa      View alignments
>XP_004834568.1
MEELTAFVSKSFDQKVKEKKEAITYREVLESGPLRGAKEPSGCAEPGRDDRSSPAVRAAGGGGGGGGGGGGGGGGGAGGGGGAGGGAGGGRSPVRELDMGAAERSREPGSPRLTEVSPELKDRKEDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQLHKGVLIGAASQFEACRVAPYVNVGALRMPFQQDSHCNVTPLSFQVQAQLQLDSAVAHAHHHLHPHLAAHAPYMMFPAPPFGLPLATLAADSASAASVVAAAAAAKTTSKNSSIADLRLKAKKHAAALGL