Details from NCBI annotation

Gene Symbol Ptx3
Gene Name pentraxin 3, long
Entrez Gene ID 101723987

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTX3 ENSCPOG00000000187 (Guinea pig)

Gene Details

pentraxin 3, long

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000162, Guinea pig)

Protein Percentage 91.34%
CDS Percentage 92.91%
Ka/Ks Ratio 0.29609 (Ka = 0.0472, Ks = 0.1594)

PTX3 ENSG00000163661 (Human)

Gene Details

pentraxin 3, long

External Links

Gene Match (Ensembl Protein ID: ENSP00000295927, Human)

Protein Percentage 86.61%
CDS Percentage 89.85%
Ka/Ks Ratio 0.29057 (Ka = 0.0704, Ks = 0.2424)

Ptx3 ENSMUSG00000027832 (Mouse)

Gene Details

pentraxin related gene

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029421, Mouse)

Protein Percentage 81.89%
CDS Percentage 84.6%
Ka/Ks Ratio 0.21203 (Ka = 0.0985, Ks = 0.4647)

Ptx3 ENSRNOG00000012280 (Rat)

Gene Details

pentraxin 3, long (Ptx3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016541, Rat)

Protein Percentage 81.36%
CDS Percentage 83.99%
Ka/Ks Ratio 0.21279 (Ka = 0.1035, Ks = 0.4862)

Genome Location

Sequence Coding sequence

Length: 1146 bp    Location: 35125605..35131367   Strand: +
>XM_004834508.1
ATGCATCTCCTTGTAATTCTGTTTTGTGCTCTCTGGTCTGCAGCGTTGGCCGAAAACTCGGATGATTATGAGCTCATGTATGTGAATATGGACAACGAAATATTCAATGGACTCCATCCCACTGAAGACCCTACGCCGTGCGACTGCAGCCGGGAGCACTCCGAGTGGGACAAGCTCTTCATCATGCTGGAGAACTCGCAGATGAGGGAGAGCATGCTGCTGCAGGCCACGGACGACGTGCTCCGCGGAGAGCTGCAGAAGTTGCGGGCGGAGCTCGGCCGGCTCTCGGGCAGCCTGGCGAGGCCGTGCGCACCCGCGGCCCCGGCGGAGGCCAGGCTGGCCCGGGCGCTGGAAGAGCTGCTGCGGGAGAGCCGCGACGCGAGCAGCAGGCTGGCGCGCCTGGAAGGCGCCGGGGCTCTGCGCCCGGAGGAGGCGGGGCGCGCCCTGGGCGCGGTGCTGGAGGAGCTGCGGCGGACCCGAGCCGACCTGCGGGCGGTGCAGGGCTGGGCGGCCCAGCGCTGGCTGCCGGCGGGTTGTGAAACAGCGATTTTATTCCCAATGCGTTCCAAGAAGATTTTTGGAAGCGTGCATCCAATGAGACCAATGAAGCTTGAATCTTTTAGTGCCTGTATTTGGGTCAAAGCCACAGATGTATTAAACAAAACCATCCTGTTTTCCTATGGCACAAAGAGGAATCCATATGAGATCCAGCTGTACCTCAGCTACCAGTCCATAGTGTTTGTGGTGGGTGGAGAGGAAAACAAACTGGTTGCTGATACTGTGATTTCTCTGGGAAAGTGGACCCACCTGTGCAGTACCTGGAATTCAGTGGAAGGGCTCATGTACCTATGGGCAAATAGTGAACTAGTGGCTACCACAGTGGATATGGCCACAAATCATGTTGTTCCTGAGGGAGGAATCCTGCAGATTGGCCAAGAAAAGAATGGCTGCTGTGTGGGTGGGGGCTTTGACGAAACATTAGCCTTTTCTGGAAGACTCACGGGCTTCAATATCTGGAATTATGTCCTCAGCAAGGAAGAGATAAGAGAGACTGGAGGAGCAGAGTCTTGTCACATCCGGGGAAATGTTGTTGGGTGGGGAGTCACTGAGATTCAGCCACATGGAGGAGCTCAATATGTTTCATAA

Related Sequences

XP_004834565.1 Protein

Ptx3 PREDICTED: pentraxin-related protein PTX3 [Heterocephalus glaber]

Length: 381 aa      View alignments
>XP_004834565.1
MHLLVILFCALWSAALAENSDDYELMYVNMDNEIFNGLHPTEDPTPCDCSREHSEWDKLFIMLENSQMRESMLLQATDDVLRGELQKLRAELGRLSGSLARPCAPAAPAEARLARALEELLRESRDASSRLARLEGAGALRPEEAGRALGAVLEELRRTRADLRAVQGWAAQRWLPAGCETAILFPMRSKKIFGSVHPMRPMKLESFSACIWVKATDVLNKTILFSYGTKRNPYEIQLYLSYQSIVFVVGGEENKLVADTVISLGKWTHLCSTWNSVEGLMYLWANSELVATTVDMATNHVVPEGGILQIGQEKNGCCVGGGFDETLAFSGRLTGFNIWNYVLSKEEIRETGGAESCHIRGNVVGWGVTEIQPHGGAQYVS