Sequence details NCBI ID: XM_004834445.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pfn2
Gene Name profilin 2, transcript variant X3
Entrez Gene ID 101725935

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PFN2 ENSCPOG00000000518 (Guinea pig)

Gene Details

profilin 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000455, Guinea pig)

Protein Percentage 93.57%
CDS Percentage 91.19%
Ka/Ks Ratio 0.183 (Ka = 0.048, Ks = 0.2624)

PFN2 ENSG00000070087 (Human)

Gene Details

profilin 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000239940, Human)

Protein Percentage 100.0%
CDS Percentage 97.38%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1011)

Pfn2 ENSMUSG00000027805 (Mouse)

Gene Details

profilin 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000068890, Mouse)

Protein Percentage 99.29%
CDS Percentage 96.67%
Ka/Ks Ratio 0.02646 (Ka = 0.0034, Ks = 0.1271)

Genome Location

Sequence Coding sequence

Length: 423 bp    Location: 27312502..27307718   Strand: -
Raw sequence   
>XM_004834445.1
ATGGCCGGTTGGCAGAGCTACGTGGATAACCTGATGTGCGATGGCTGCTGCCAGGAGGCCGCCATTGTCGGCTACTGCGACGCCAAATACGTCTGGGCAGCCACGGCCGGGGGCGTCTTCCAGAGCATTACGCCAATAGAAATAGACATGATTGTAGGAAAAGACCGGGAAGGTTTCTTTACCAACGGTTTGACTCTTGGCGCAAAGAAGTGTTCAGTGATCAGAGATAGTCTATATGTTGATGGTGACTGCACAATGGACATCCGGACAAAGAGTCAAGGTGGGGAGCCAACGTACAATGTTGCCGTGGGCAGAGCTGGTAGAGTCTTGGTCTTTGTAATGGGAAAAGAAGGGGTCCATGGAGGCGGATTGAATAAGAAGGCATACTCAATGGCAAAATACTTGAGAGACTCTGGGTTCTAG

Related Sequences

XP_004834502.1 Protein

Pfn2 PREDICTED: profilin-2 isoform X3 [Heterocephalus glaber]

Length: 140 aa      
>XP_004834502.1
MAGWQSYVDNLMCDGCCQEAAIVGYCDAKYVWAATAGGVFQSITPIEIDMIVGKDREGFFTNGLTLGAKKCSVIRDSLYVDGDCTMDIRTKSQGGEPTYNVAVGRAGRVLVFVMGKEGVHGGGLNKKAYSMAKYLRDSGF