Details from NCBI annotation

Gene Symbol Tm4sf1
Gene Name transmembrane 4 L six family member 1, transcript variant X1
Entrez Gene ID 101721271

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TM4SF1 ENSCPOG00000013256 (Guinea pig)

Gene Details

transmembrane 4 L six family member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011933, Guinea pig)

Protein Percentage 87.13%
CDS Percentage 88.45%
Ka/Ks Ratio 0.24413 (Ka = 0.0746, Ks = 0.3057)

TM4SF1 ENSG00000169908 (Human)

Gene Details

transmembrane 4 L six family member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000304277, Human)

Protein Percentage 86.14%
CDS Percentage 86.8%
Ka/Ks Ratio 0.2216 (Ka = 0.0807, Ks = 0.3643)

Tm4sf1 ENSMUSG00000027800 (Mouse)

Gene Details

transmembrane 4 superfamily member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000130999, Mouse)

Protein Percentage 77.72%
CDS Percentage 80.36%
Ka/Ks Ratio 0.28975 (Ka = 0.1498, Ks = 0.5169)

Tm4sf1 ENSRNOG00000015812 (Rat)

Gene Details

transmembrane 4 L six family member 1 (Tm4sf1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021536, Rat)

Protein Percentage 79.21%
CDS Percentage 80.53%
Ka/Ks Ratio 0.2789 (Ka = 0.1452, Ks = 0.5205)

Genome Location

Sequence Coding sequence

Length: 747 bp    Location: 26652902..26645448   Strand: -
>XM_004834431.1
ATGTGCTATGGCAAATGTGCGCGATGCATCGGACATTCTCTTGTGTGGCTCTCTGTCCTCTGCATAGTAGCTAATATTTTGCTTTACTTTCCCAATGGGGAGACAAAGTATGCATCTGAAAACAACCTCAGCCGCTTTGTGTTGTTTTTCGGTGGTATTGCAGGAGGGGGCTTGCTGATGCTCCTGCCAGCATTTGTCTTCATTGGGCTGGAAGAGGAGGACTGCTGTGGCTGCTGTGGCCACGACAGCTGTGGCAAGAGATGCGCAATGCTTTCTTCTATATTGGCTGCTCTCATTGGAATCTCAGGATCTGGCTACTGTGTCACCGTGGCATCTCTGGGCTTAGCAGAAGGACCGTGGTGTCTTGATTCTCTCGGCCAGTGGAACTATACCTTCGCCAGCACTGAAGGACAGTACCTTCTGGATAGCACCACATGGTCCCAGTGCAAGGAACCCAAGCACATCGTAGAGTGGAATGTGACACTGTTTTCTATCCTCTTGGCTCTTGGTGGAATCGAATTCATCTTGTGTCTCATTCAAGTAATAAATGGATTGCTTGGAGGCATCTGTGGCTACTGCTGCTCTCGCCAGCAGGTAAGAACCTGTATGAAAATGCCCTGTCCTGGGCATGGTGTTTCAGCTGTCATAATGCACCATTCTTTTCATCAAAGAGAAAAAGGCAAAACTAAACATGCTCCAACTGGCAATGTTTATTCTTCCATCATCCCTGTGGCACTGGATCAGTAG

Related Sequences

XP_004834488.1 Protein

Tm4sf1 PREDICTED: transmembrane 4 L6 family member 1 isoform X1 [Heterocephalus glaber]

Length: 248 aa      View alignments
>XP_004834488.1
MCYGKCARCIGHSLVWLSVLCIVANILLYFPNGETKYASENNLSRFVLFFGGIAGGGLLMLLPAFVFIGLEEEDCCGCCGHDSCGKRCAMLSSILAALIGISGSGYCVTVASLGLAEGPWCLDSLGQWNYTFASTEGQYLLDSTTWSQCKEPKHIVEWNVTLFSILLALGGIEFILCLIQVINGLLGGICGYCCSRQQVRTCMKMPCPGHGVSAVIMHHSFHQREKGKTKHAPTGNVYSSIIPVALDQ