Gene Symbol | Hps3 |
---|---|
Gene Name | Hermansky-Pudlak syndrome 3, transcript variant X2 |
Entrez Gene ID | 101717679 |
For more information consult the page for NW_004624730.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
Protein Percentage | 90.0% |
---|---|
CDS Percentage | 91.14% |
Ka/Ks Ratio | 0.2834 (Ka = 0.058, Ks = 0.2047) |
Hermansky-Pudlak syndrome 3
Protein Percentage | 88.73% |
---|---|
CDS Percentage | 89.37% |
Ka/Ks Ratio | 0.21059 (Ka = 0.0597, Ks = 0.2834) |
Hermansky-Pudlak syndrome 3 homolog (human)
Protein Percentage | 80.72% |
---|---|
CDS Percentage | 82.72% |
Ka/Ks Ratio | 0.22268 (Ka = 0.1124, Ks = 0.5045) |
Hermansky-Pudlak syndrome 3 homolog (human) (Hps3), mRNA
Protein Percentage | 81.4% |
---|---|
CDS Percentage | 83.33% |
Ka/Ks Ratio | 0.23262 (Ka = 0.1102, Ks = 0.4739) |
>XM_004834422.1 ATGGTGCATCTGTACAACCTGCACCCGTTTGGGTCGCAGCAGGTGGTTCCCTGCAAGCTGGAGCCAGAGCAGTTCTGCGGCGGGGGGTGCGACGCGCTGTTCGTGGCGGCCGGCTGCAAGGTGGAGGCGTTCGCCGTGACAGGCCAGGAGCTGTGCCAGCCGAGGTGCGCCTTCTCTACGCTGGGCAGGGTGCTGCGCATGGCCTACAGCGAGGCCGGGGACTATTTGGTAGCAATTGAAGAGAAAAACAAGGCTATGTTTCTACGTGCTTATGTGAACTGGAGAAGTAAAAGGGCGGAGAACTCTCGAGTGTGTATCCGAATGATTGGACATAATGTGGAGGCGCCCTTCCGGGAATCCTTCAAAGACCAGATGTCCATTGTTGAAATGCCGCTCTCTGAGGCCCCCTTGTGCATTTCCTGTTGCCCTGTGAAAGGAGACCTCCTTGTTGGCTGCACAAATAAATTAGTCTTATTTAGTTTGACGTACCAGGTCATTAATGAGGAATTCTCAATGTTGGACTTTGAACGTAGTTTAATTATCCATGTGGATAATATCACTCCTGTCGAAATTTCTTTTTGTGTTGGATATGTTGCTGTCATGTCAGATTTGGAAGTCTTAATCTTAAAACTGGAATCGGACTCTAAAAACAGAGAGAGAGTTAACCACCAGCCATATAAGACCAGCAATCCAGTAAAACAGACAAATGAAGATTTCAGTAATGAAACTTCACAGATTGAGTCAGATGATTTTGTTATCTGCCAGAAGCCCATGGAGCTTCTTGGTGAAAAAAGTGAACAATGTGGGATATCTGTTACACTGGAATCTACAGGATTAGCTGATGAAAAAATAAAATACTTCCACATCCGGCATCTGCTCTATAGACGTTTTACTCCTGATATTTCCTTCTATGTCTCATCTGATGACATCAGGTTCCATTCCCTTCAGCTGCTACCCATTTACCAGACAGGTTCTCTTACTTCTGATGAAAAAAATTCTCCTCAGGGAAAAGAGTTGCTGAGTCTTTTTTGTTTTTTCTCATTACCTCACATGGGCTACCTCTACATGGTTGTCAAATCTGTTGAATTAATCTCTGTCTACCAATACCCTGAGAAGTCTCAGCAGGCGGTGCTCACACCACAGTTTTTGCACGTCATCACCAGAAACAACCTGCAGTGTTTCACAGTGCGATGTAGCGCAGCAGCAGCTCGTGAGGAGGACCCCTACATGGACACCACCCTGAAGGCTTGCCCACCTGTCAGTATGGATGTCTGTGCTTTAAGAATACAGCTTTTTATAGGCTTGAAAGCCATCTGTCATTTTAAAAATCATGTAGTACTTTTAACCAAGGCAGACCCTGAAGCCATTCCAGACAGAAGAGAATCGCCCAGGAGATTTCTTTCTAGAAAAGATACCAGTGTTAAGATCAAACCTCCTGTAGCTGAGGCTGGGTGGAGTTTGTATATTGTGAATACGATCTCACCAGTGCAACTATACAAAGAAATGGTAGACTATAGTAATACCTACAAGACTGTAAAAACCCAGAGCTGCATCCACCTTCTCAGTGAGGCCCATCTGTTAGTAAGAGCTGCCCTGATGGATACCTGTCAGCTGCAACCTGGAGAGAAAGCAGAGCTTTTGGAAGCCTTTAAAGAAAGCTGTGGGCACCTTGGAGACTGTTACAGCAGGCTTGACACCCAGCATTCCCACCTCGCCTTGCCATACTATAAGATGTCTGGTTTGTCTCTGGCTGAAGTTTTGACCCGTGTGGATTGGGCAGCAGAGTATGAATCACAGAAATATGAGAGGGGATTGATCTTTTATATTAATCATTCACTTTGTGAAAACCTGGATGAAGAATTAAGTGAAGAATTAGCAGCAAAAGTGGTTCAGATGTTTCACGTAGCTGAGCCGAAACAATTGCCCCATATTCTCTGTAGTCCTTCTGTGAAGAACGTGAATCCCTTAACTGCCTTGAGCTGTCTAAGGAAACTGGATACCCGTGGACTCTCCTCAGTCTTAGTGACACTGACAAAAGCAGCACTGGCTCTAAAGATGGGAGATCTTGACATGCATAGAAGTGAAATGAAAAGTCATTCAGAGATGAAGTTGGTATGTGGCTTCATTCTGGAACCTCGGCTACTGATTCAACAGAGGAAGAGACAGATTGTTCCAACGGAGCTTGCAGTTCACTTGAAGGAGACTCAGCCTGGATTGCTTGTGGCTGCAGTCCTGGGTTTACAGAAGAATAACAAAATTGGAATTGAAGAGGCGGATTCTTTCTTTAAGGTGCTCTGTGGTAAGGATGAAGATACGATTCCTCAGCTCTTGGTAGACTTTTGGGAAGCGCAGCTGGTGGCCTGTCTCCCAGATGTGGTACTTCAGGAGCTCTGTTACAAGCTCATATCACAGTACACCTGGAGATTATCTAAGAGACAACTTCCTGATACCACACCCTTGAGAACATCAGAGGATCTGATAAATGCCTGTAGTCATTATGGCTTAATCTATCCCTGGGTTCATGTTTTAATATCATCTGATTCCTTAGCCAATAAAAATTATACAGAAGACCTTTCAAAATTACAGTCTCTTATATGTGGTCCTTCATTTGACATAGCTTCCATTGTTCCCTTCTTGGAGCCACTCTCAGAAGACACTGTTGCTGGCCTCAGTGTCCATGTTCTGTGTCGTACCCGTCTCAAAGAATACGAACAGTGCATAGACACACTGTTAGAGAGATGTCCAGAGGCGGTCATTCCATATGCTAATCATGAGCTGAAAGAAGAGAACCGGACTCTATGGTGGAAAAAACTTCTACCTGAACTTTGTCAGAGAATAAAGTGTGGTGGAGAGAAGTATCAGTTTTACCTGTCATCATTAAAAGAAACATTGTCAGTTGTTGCCGTGGACCTAGAATTAAGGGATTTCTTAAATGTTCTCCCAGAAGATGGCACTGCAGCGTTTTTCTTGCCTTATCTTCTTTATTGTAGCCAAAAGAAATCATTGACATAA
Hps3 PREDICTED: Hermansky-Pudlak syndrome 3 protein isoform X2 [Heterocephalus glaber]
Length: 1003 aa View alignments>XP_004834479.1 MVHLYNLHPFGSQQVVPCKLEPEQFCGGGCDALFVAAGCKVEAFAVTGQELCQPRCAFSTLGRVLRMAYSEAGDYLVAIEEKNKAMFLRAYVNWRSKRAENSRVCIRMIGHNVEAPFRESFKDQMSIVEMPLSEAPLCISCCPVKGDLLVGCTNKLVLFSLTYQVINEEFSMLDFERSLIIHVDNITPVEISFCVGYVAVMSDLEVLILKLESDSKNRERVNHQPYKTSNPVKQTNEDFSNETSQIESDDFVICQKPMELLGEKSEQCGISVTLESTGLADEKIKYFHIRHLLYRRFTPDISFYVSSDDIRFHSLQLLPIYQTGSLTSDEKNSPQGKELLSLFCFFSLPHMGYLYMVVKSVELISVYQYPEKSQQAVLTPQFLHVITRNNLQCFTVRCSAAAAREEDPYMDTTLKACPPVSMDVCALRIQLFIGLKAICHFKNHVVLLTKADPEAIPDRRESPRRFLSRKDTSVKIKPPVAEAGWSLYIVNTISPVQLYKEMVDYSNTYKTVKTQSCIHLLSEAHLLVRAALMDTCQLQPGEKAELLEAFKESCGHLGDCYSRLDTQHSHLALPYYKMSGLSLAEVLTRVDWAAEYESQKYERGLIFYINHSLCENLDEELSEELAAKVVQMFHVAEPKQLPHILCSPSVKNVNPLTALSCLRKLDTRGLSSVLVTLTKAALALKMGDLDMHRSEMKSHSEMKLVCGFILEPRLLIQQRKRQIVPTELAVHLKETQPGLLVAAVLGLQKNNKIGIEEADSFFKVLCGKDEDTIPQLLVDFWEAQLVACLPDVVLQELCYKLISQYTWRLSKRQLPDTTPLRTSEDLINACSHYGLIYPWVHVLISSDSLANKNYTEDLSKLQSLICGPSFDIASIVPFLEPLSEDTVAGLSVHVLCRTRLKEYEQCIDTLLERCPEAVIPYANHELKEENRTLWWKKLLPELCQRIKCGGEKYQFYLSSLKETLSVVAVDLELRDFLNVLPEDGTAAFFLPYLLYCSQKKSLT