Sequence details NCBI ID: XM_004834377.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Xrn1
Gene Name 5'-3' exoribonuclease 1, transcript variant X2
Entrez Gene ID 101701152

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 5166 bp    Location: 19020833..18906599   Strand: -
Raw sequence   
>XM_004834377.1
ATGGGAGTCCCCAAGTTTTACCGGTGGATCTCGGAGCGGTATCCTTGCCTCAGCGAAGTAGTGAAAGAGCATCAGATTCCTGAATTTGACAACTTGTACCTGGATATGAATGGAATTATACATCAGTGCTCTCATCCTAATGATGATGATGTCCACTTTAGAATTTCAGATGACAAAATCTTTACTGACATTTTTCACTACTTGGAGGTGTTGTTTCGCATTATTAAACCTAGGAAAGTGTTCTTTATGGCTGTTGATGGTGTAGCTCCTCGAGCAAAAATGAATCAACAGCGTGGGAGGCGTTTTAGGTCAGCCAAGGAGGCAGAAGACAAAATTAAAAAGGCAATTGAAAAGGGGGAAACTCTTCCTACAGAGGCCAGGTTTGATTCCAACTGTATTACACCAGGGACTGAATTCATGGCCAGGTTACATGAACATCTGAAGTATTTTGTAAATGTGAAAATTTCCACAGACAAGTCATGGCAAGGAGTTACCATCTACTTCTCAGGCCATGAGACTCCCGGAGAAGGAGAACATAAAATCATGGAATTTATCAGATCTGAAAAAGCAAAGCCAGATCATGACCCAAACACCAGACACTGTCTTTATGGTCTAGATGCTGACTTGATCATGCTTGGATTAACAAGTCACGAGGCACATTTTTCTCTTTTAAGAGAAGAAGTTCGATTTGGTGGCAAAAAAACACAGAGGGTGTGTGCACCAGAAGAAACCACATTTCACCTCCTACATTTGTCATTAATGAGAGAGTATATTGACTACGAGTTTTCAGTATTAAAAGAAAATATTACATTTAAATATGATATTGAAAGAATTATAGATGATTGGATTTTGATGGGATTTCTTGTTGGCAATGATTTTATCCCTCATCTACCTCATTTACATATTAATCATGATGCGCTGCCTCTTCTTTATGGAACATATATTACCATCCTGCCCGAACTTGGAGGTTATATTAATGAAAGTGGACATCTCAATTTACCTCGATTTGAAAAATACCTTGTGAAACTATCTGATTTTGATCGGGAGCACTTCAGTGAAGTTTTTGTGGACCTAAAGTGGTTTGAAAGCAAAGTTGGTAACAAGTATCTCAATGAAGCAGCAGGTATCGCAGCTGAAGAAGCCAAGAACTACAAGGAAAAGAAAAAATCAAAGGGCCAGGAAAATTCTGTATGTTGGGCTGCTTTAGACAAAAGTGAAGGTGAAATGGTAGTTTCTAAGGATAATTTAGAAGATGAGACTGAAGATGATGATCTATTTGAAACCGAGTTTAGACAATACAAAAGAACATATTACATGACGAAGATGGGGGTTGATGTGGTATCTGATGACTTTCTGGCTGATCAAGCTGTATGTTATGTTCAAGCGATACAGTGGATTTTGCACTATTACTATCATGGTGTTCAGTCCTGGAGTTGGTATTATCCCTATCATTATGCACCTTTCCTATCTGATATCCGAAATATCAGTACACTCAAAATCCATTTTGAACTAGGAAAACCTTTTAAGCCATTTGAGCAGCTTCTTGCTGTACTTCCAGCAGCTAGCAAAAATTTGCTTCCTGTATGCTACCAGCATTTGATGACCAGTGAAGACTCACCGATTATAGAGTATTATCCACCTGATTTTAAAACTGATCTAAATGGAAAACAACAGGAATGGGAAGCTGTTGTATTAATACCTTTTATTGATGAGAAGCGATTGTTGGAAGCCATGGAGACATGTAACCACTCCCTCAAAGAGGAAGAGAGGAAGAGAAACCGACATAGTGAGTGCCTGATGTGCTGGTATGATAAAGACACAGAGTTTATCTACCCTTCTCCATGGCCAGAAAAATTCCCTGCCATAGAACGATGCTATACACGGTACAAAATAATATCACTAGATGCTTGGCATGTAGATATAAGTAAGAACAAAATAACCAGAGTTGACCAGAAGGCATTGTATTTCTGTGGATTCCCTACTTTGAAACACATCAAACATAAATTTTTTTTGAAGAAAAGTGGTGTTCAAGTATTCCAGCAAAGCAGTCGTGGAGAAAACATGATGTTGGAAATCTTAGTGAATGCAGAATCTGATGAACTTAGTATAGAAAATGTAGCTTCATCAGTGCTTGGAAAGTCTGTCTTTGTTAATTGGCCTCACCTTGAAGAAGCTAGAGTTGTTGCTGTATCAGATGGTGAAACTAAATTTTACTTGGAAGAACCTCCAGGAACACAGAAGCTTTATTTGGGAAGAACTGCTCCACCATCTAAAGTGATACATCTTGGCGATAAAGAGCAATCTAATTGGACAAAAGAGGTACAAGGAATATCAGAACACTACTTGAGAAGAAAAGGAATAATAATAAATGAAACATCTATGGTTGTATATGCTCAGTTACTCACAGGTCGTAAATATCAGATAAATCATAATGGTGAAGTTCGTCTGGAAAAGCAGTGGTCAAAACAAATTCTTCCTTTTGTCTATCAAACCATTGTCAAAGACATCCAAGCTTTCGACTCTCGTTTCTCCAGTATCAAAACATTGGATGATTTGTTTCCTCCTGGAAGTGTGGTGTTTATGCTGGGGACTCCTTATTATGGCTGCACAGGAGAAGTTCAAGTTTCAGGTGATGTGATCACAGAAGGCAGAATTCGTGTGGTTTTCAGCATTCCATGTGAACCCAATCTTGATGCTTTAATACAGAACCAGCATAAATATTCTATAAAGTACAACCCAGGATATGTATTGGCCAGTCGCCTTGGAGTGAGTGGATACCTTGTTTCAAGGTTTACAGGAAGTATTTTTATTGGAAGAGGATCTAGGAGAAACCCTCATGGAGACCATAAAGCAAATGTGGGTTTAAATCTCAAATTCAACAAAAAAAATGAGGAGGTACCTGGATATACTAAGAAAGTTGGAAGTGAATGGATGTACTCATCTGCAGCAGAACAACTTCTTGCAGAATATTTAGAGAGAGCTCCAGAACTGTTTAGTTATATAGCCAAAAATAGCCAAGAGGATGTGTTCTATGAAGATGACATTTGGCCTGGAGAAAATGAGAATGGTGCTGAGAAAGTTCAAGAAATTATTACTTGGCTAAAAGGACATCCTGTCAGTACTTTGTCTCGTTCATCTTGTGATTTACAAATTCTGGATGCAGCTATTGTTGAGAAAATTGAGGAAGAAGTTGATAAATGCAAGCAAAGAAAAAATAACAAGAAAGTACGGGTGACAGTAAAGCCCCACTTGCTGTACAGACCTTTAGAACAACAACATGGAGTCATTCCTGATCGAGATGCAGAATTTCGTCTCTTTGACCGTGTAGTGAACGTGAGAGAGAATTTTTCAGTTCCAGTTGGCCTTCGGGGCACCATCATAGGAATTAAAGGGGCTAATAGAGAAGCTGATGTACTATTTGAAGTATTGTTTGATGAAGAATTTCCTGGAGGATTAACAATAAGGTGCTCACCTGGAAAAGGTTATCGATTGCCAACAAGTGCCTTAGTGAACCTTTCTCATGGAAGTCGCTCGGAAACTGGAAATCAGAAGTTGACAGCCATTGTGAAACCACAGCCAGCTGTAAATCAATATAGCTCAAATTCATCAGTTTCTCCTGGCCATCTCGGAGGCCTCAACCATTCCTCTCAATCACTTTTTGTTCCTACTCAAGTATCTACTAAAGCTGATGATGAATTTTGCAACATTTGGCAATCCTTACAAGGGTCCAGAAAAATTCAGCACTTTCAGCCATCTATACAAGAGAAGGGTCCAGTTCTACCTCAAGAAATAAGTCAAGTAATTCAACAGCATAAATCTGGCTTTTATGACAACAGTGTTAAGTATCAGCAAAGAAAACATGAACCTCACCGAAAATTTAAAGAAGAGTGTAAGAGTCCTAAAGCTGAGTGTCGGTCACAAAAAATGTCCAGTAAGCAGGCTTTTGGAGGGTCTGCCAAATGTAATATTAAGTTACTGAAGAGAAATGAACGTCCTGAAGTCTCAGAAATCCAAAAGGCTGTGACTGGTTACCCAAATGCTACTGATAAGCCTAACTCTGGAATTGAGAACTTTTTAGCATCCTTGAATATCTCTAAAGAAAATGAATTACCATCATCTCATCATGGAGAGCCTCCAAATGAAGAGCATTTGTCTCCACAGTCATTTGCTATGAAGGGAACACGAATGCTTAAAGAAATTCTAAAAATTGATGGTTCTGACACAGTGGACCCTAAGAATGAAATGAAACGATATGGAAATGAAGTTACTGTTTCTTCTAATAGAAGAGATGAATATGGACTATCCTCACAGCCTAAACAAAATAAGAAATTAGCGCCTTATATGAACAAGCTTCACCGTGCCAATGAATACCACAGTATTCCGTCTGTGGACAGTACGTGCTGGCCTATTCCCAGCCAGGTCTCTTCTGTGTCCACACCAGTAACTGAACTTGCTCGAATTTGTTCCCTTGTTGGGATGCCACAACCAGATTTCTCCTTTCTGAGAACACCTCAGACAATGACAGTTTGCCAGGTAAAATTATCAAATGGTTTACTGGTGCATGGGCCACAGTGCCGCTCTGAAAATGAAGCCAAGGAGAAAGCTGCACTTTTTGCTTTACAACAACTGGGCTCCTTAGGAGTGAATTTTCCTTTGCCTCCACCACTATTTCCAAATTATCCTCCTGCTATACCACCTGGAACCATTCCTCCAGTTTTTCCCCAACCTCCTGTTCCGTGGGGTCCACCATTGCCAGTTCCTGGAAAGCCCTTCCATCAGACTCTGTACCCTGGGGCTGTGCCCACAGCTGGAGGAATAATGCCAGGTGGTGCGCACAATCAGTTCATACCTTTGCAGGTCATGAAAAAAAGAGTTGCAAACAAAAAGAACTTTGAGAATAAAGAAACCCAGAGCTCTTCTCAAGCCACCCCAACACAGACTAGCAAGCCAGGGTCTTCTGATATTGCCAAAGTGACTGCACAGGAAAGTTCATCAGCCCCTTTGAACTCCTCTCAGGTTGCTCAGGCTGCATCTTCTTTTCAAGGTGAAACTGCCTCCCACGGCAGCCATAATGCACCTCACCAGAAGGCAGCACCAAGCTCTTCTTCAAGAAGAAGATCAAGGAAACTGGCTGTCAATTTTGGCGTTTCTAAACCTTCTGAATAA

Related Sequences

XP_004834434.1 Protein

Xrn1 PREDICTED: 5'-3' exoribonuclease 1 isoform X2 [Heterocephalus glaber]

Length: 1721 aa      
>XP_004834434.1
MGVPKFYRWISERYPCLSEVVKEHQIPEFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRRFRSAKEAEDKIKKAIEKGETLPTEARFDSNCITPGTEFMARLHEHLKYFVNVKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQRVCAPEETTFHLLHLSLMREYIDYEFSVLKENITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTYITILPELGGYINESGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFESKVGNKYLNEAAGIAAEEAKNYKEKKKSKGQENSVCWAALDKSEGEMVVSKDNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLADQAVCYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELGKPFKPFEQLLAVLPAASKNLLPVCYQHLMTSEDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKEEERKRNRHSECLMCWYDKDTEFIYPSPWPEKFPAIERCYTRYKIISLDAWHVDISKNKITRVDQKALYFCGFPTLKHIKHKFFLKKSGVQVFQQSSRGENMMLEILVNAESDELSIENVASSVLGKSVFVNWPHLEEARVVAVSDGETKFYLEEPPGTQKLYLGRTAPPSKVIHLGDKEQSNWTKEVQGISEHYLRRKGIIINETSMVVYAQLLTGRKYQINHNGEVRLEKQWSKQILPFVYQTIVKDIQAFDSRFSSIKTLDDLFPPGSVVFMLGTPYYGCTGEVQVSGDVITEGRIRVVFSIPCEPNLDALIQNQHKYSIKYNPGYVLASRLGVSGYLVSRFTGSIFIGRGSRRNPHGDHKANVGLNLKFNKKNEEVPGYTKKVGSEWMYSSAAEQLLAEYLERAPELFSYIAKNSQEDVFYEDDIWPGENENGAEKVQEIITWLKGHPVSTLSRSSCDLQILDAAIVEKIEEEVDKCKQRKNNKKVRVTVKPHLLYRPLEQQHGVIPDRDAEFRLFDRVVNVRENFSVPVGLRGTIIGIKGANREADVLFEVLFDEEFPGGLTIRCSPGKGYRLPTSALVNLSHGSRSETGNQKLTAIVKPQPAVNQYSSNSSVSPGHLGGLNHSSQSLFVPTQVSTKADDEFCNIWQSLQGSRKIQHFQPSIQEKGPVLPQEISQVIQQHKSGFYDNSVKYQQRKHEPHRKFKEECKSPKAECRSQKMSSKQAFGGSAKCNIKLLKRNERPEVSEIQKAVTGYPNATDKPNSGIENFLASLNISKENELPSSHHGEPPNEEHLSPQSFAMKGTRMLKEILKIDGSDTVDPKNEMKRYGNEVTVSSNRRDEYGLSSQPKQNKKLAPYMNKLHRANEYHSIPSVDSTCWPIPSQVSSVSTPVTELARICSLVGMPQPDFSFLRTPQTMTVCQVKLSNGLLVHGPQCRSENEAKEKAALFALQQLGSLGVNFPLPPPLFPNYPPAIPPGTIPPVFPQPPVPWGPPLPVPGKPFHQTLYPGAVPTAGGIMPGGAHNQFIPLQVMKKRVANKKNFENKETQSSSQATPTQTSKPGSSDIAKVTAQESSSAPLNSSQVAQAASSFQGETASHGSHNAPHQKAAPSSSSRRRSRKLAVNFGVSKPSE