Details from NCBI annotation

Gene Symbol Pccb
Gene Name propionyl CoA carboxylase, beta polypeptide, transcript variant X4
Entrez Gene ID 101699369

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PCCB ENSCPOG00000011920 (Guinea pig)

Gene Details

propionyl CoA carboxylase, beta polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010724, Guinea pig)

Protein Percentage 95.92%
CDS Percentage 94.68%
Ka/Ks Ratio 0.13556 (Ka = 0.0207, Ks = 0.1528)

PCCB ENSG00000114054 (Human)

Gene Details

propionyl CoA carboxylase, beta polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSP00000419027, Human)

Protein Percentage 96.1%
CDS Percentage 92.39%
Ka/Ks Ratio 0.07408 (Ka = 0.0199, Ks = 0.2682)

Pccb ENSMUSG00000032527 (Mouse)

Gene Details

propionyl Coenzyme A carboxylase, beta polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000035116, Mouse)

Protein Percentage 92.58%
CDS Percentage 87.38%
Ka/Ks Ratio 0.07598 (Ka = 0.0402, Ks = 0.5297)

Pccb ENSRNOG00000015869 (Rat)

Gene Details

propionyl CoA carboxylase, beta polypeptide (Pccb), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021657, Rat)

Protein Percentage 92.58%
CDS Percentage 86.89%
Ka/Ks Ratio 0.0704 (Ka = 0.0403, Ks = 0.5721)

Genome Location

Sequence Coding sequence

Length: 1620 bp    Location: 12662469..12758702   Strand: +
>XM_004834285.1
ATGGCTGCAGCAATGCGAGTGGCGGCGGCTGGAGCTAGGCTCAGCATTCTATCTAGTGGTCTCCGCGCCGCGGTCCGCAGCCTTTGCACCCAAGGCGCCTCCGTTAACGAACGTATCGAGAATAAGCGAAGCGCCGCGCTGCTGGGAGGAGGCCAGCGCCGCATTGAAGCTCAGCATAAGCGAGGAAAACTGACTGCCAGGGAGCGGATCAGTCTCTTGCTGGACCCTGGCAGCTTTGTTGAGAGTGACATGTTTGTGGAACACACATGTGCAGATTTCGGAATGGCTGCTGATAAGAATAAGTTTCCTGGAGACAGCGTGGTCACTGGAAGGGGCCGGATCAATGGAAGATTGGTTTATGTCTTCAGTCAGGATTTCACGGTTTTTGGGGGCAGTCTGTCAGGAGCACATGCTCAGAAGATCTGCAAAATCATGGACCAGGCCATAACTGTGGGTGCTCCAGTGATTGGGCTGAATGACTCTGGGGGAGCCCGGATCCAAGAGGGAGTGGAGTCCTTGGCTGGCTATGCTGACATCTTCCTGAGAAATGTCACAGCATCCGGAGTCATCCCTCAGATCTCTCTGATCATGGGCCCGTGTGCTGGTGGGGCCGTCTACTCTCCAGCCCTAACAGACTTCACGTTCATGGTGAAGGACACCTCCTACTTGTTTATCACGGGCCCTGATGTGGTGAAGTCTGTTACCAATGAGGATGTCACCCAGGAGGAGCTTGGTGGTGCCAAGACCCACACCACCATGTCAGGTGTGGCCCACAGGGCTTTTGAGAATGATGTGGATGCCCTGTGTAACCTCCGGGAGTTCTTCAACTACCTACCCCTCAGCTGTCAGGACCTGGCTCCTGTCCGCGAGTGCCATGATCCCAGTGACCGTCTGGTTCCTGAGCTTGACACAATTGTCCCTCTGGAATCTACCAAAGCCTACAACATGCTGGATATCATACACTCGGTTGTTGATGAGCGAGAATTTTTTGAGATCATGCCCAATTATGCCAAGAATATCGTTGTTGGTTTTGCAAGAATGAATGGGAGGACTGTTGGAATTGTTGGTAACCAACCCAAGGTGGCCTCAGGATGCTTGGATATTAATTCATCTGTGAAGGGGGCTCGATTTGTCAGATTCTGTGATGCATTCAATATTCCACTCATCACTTTTGTTGATGTCCCTGGCTTTCTGCCTGGCACAGCACAGGAATATGGGGGCATCATCCGGCATGGCGCCAAGCTTCTCTATGCATTTGCCGAGGCAACTGTGCCCAAAGTCACAATCATCACCAGGAAGGCCTATGGAGGTGCCTATGATGTCATGAGCTCTAAGCACCTTCTTGGTGACACCAACTATGCCTGGCCCACAGCAGAAATTGCAGTCATGGGAGCAAAGGGTGCTGTGGAGATCATCTTCAAAGGGCATGAGGATGTGGACGCTGCCCAGGCAGAGTATGTTGAGAAGTTCGCCAACCCTTTTCCTGCAGCAGTGAGAGGGTTTGTGGATGACATCATACAGCCTTCTTCTACACGTGCCCGAATCTGCTGTGACTTGGATGTCTTGGCCAGCAAGAAGGTACAGCGTCCTTGGAGGAAACATGCGAATATTCCGTTGTAA

Related Sequences

XP_004834342.1 Protein

Pccb PREDICTED: propionyl-CoA carboxylase beta chain, mitochondrial isoform X4 [Heterocephalus glaber]

Length: 539 aa      View alignments
>XP_004834342.1
MAAAMRVAAAGARLSILSSGLRAAVRSLCTQGASVNERIENKRSAALLGGGQRRIEAQHKRGKLTARERISLLLDPGSFVESDMFVEHTCADFGMAADKNKFPGDSVVTGRGRINGRLVYVFSQDFTVFGGSLSGAHAQKICKIMDQAITVGAPVIGLNDSGGARIQEGVESLAGYADIFLRNVTASGVIPQISLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGAKTHTTMSGVAHRAFENDVDALCNLREFFNYLPLSCQDLAPVRECHDPSDRLVPELDTIVPLESTKAYNMLDIIHSVVDEREFFEIMPNYAKNIVVGFARMNGRTVGIVGNQPKVASGCLDINSSVKGARFVRFCDAFNIPLITFVDVPGFLPGTAQEYGGIIRHGAKLLYAFAEATVPKVTIITRKAYGGAYDVMSSKHLLGDTNYAWPTAEIAVMGAKGAVEIIFKGHEDVDAAQAEYVEKFANPFPAAVRGFVDDIIQPSSTRARICCDLDVLASKKVQRPWRKHANIPL