Details from NCBI annotation

Gene Symbol Stag1
Gene Name stromal antigen 1, transcript variant X3
Entrez Gene ID 101698509

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

STAG1 ENSCPOG00000013210 (Guinea pig)

Gene Details

stromal antigen 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011892, Guinea pig)

Protein Percentage 98.01%
CDS Percentage 95.76%
Ka/Ks Ratio 0.07451 (Ka = 0.0111, Ks = 0.1489)

STAG1 ENSG00000118007 (Human)

Gene Details

stromal antigen 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000372689, Human)

Protein Percentage 99.6%
CDS Percentage 95.36%
Ka/Ks Ratio 0.00824 (Ka = 0.0018, Ks = 0.2157)

Stag1 ENSMUSG00000037286 (Mouse)

Gene Details

stromal antigen 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000116205, Mouse)

Protein Percentage 99.13%
CDS Percentage 92.45%
Ka/Ks Ratio 0.00963 (Ka = 0.0039, Ks = 0.4008)

Stag1 ENSRNOG00000015389 (Rat)

Gene Details

stromal antigen 1 (Stag1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061907, Rat)

Protein Percentage 99.11%
CDS Percentage 92.66%
Ka/Ks Ratio 0.01163 (Ka = 0.0044, Ks = 0.3751)

Genome Location

Sequence Coding sequence

Length: 3777 bp    Location: 13158696..12762564   Strand: -
>XM_004834281.1
ATGATTACTTCAGAGTTACCAGTGTTACAGGATTCAACTAATGAAACTACTGCCCATTCTGATGCTGGCAGCGAACTTGAAGAAACAGAGGTCAAAGGAAAAAGAAAAAGGGGTCGTCCTGGCCGGCCTCCATCTACAAATAAGAAACCTCGAAAATCTCCAGGGGAGAAGAGCAGAATTGAAGCTGGAGTTAGAGGAACAGGACGTGGAAGAGCTAATGGGCACCCTCAGCAGAATGGTGAAGGGGAGCCTGTCACATTATTTGAGGTGGTGAAACTGGGGAAAAGTGCAATGCAGTCCGTGGTGGACGACTGGATTGAATCATATAAACAAGACAGGGACATCGCACTTCTGGATTTAATCAACTTTTTTATCCAGTGTTCAGGATGTCGAGGTACTGTGAGAATAGAGATGTTTCGAAATATGCAGAATGCAGAAATCATCAGAAAAATGACTGAAGAATTTGATGAGGACAGTGGTGATTATCCCCTTACCATGCCTGGACCCCAGTGGAAAAAATTTCGTTCAAACTTTTGTGAATTTATTGGAGTCCTGATTCGACAGTGTCAATATAGCATAATTTATGATGAGTATATGATGGACACAGTAATCTCCCTTTTGACTGGTTTGTCAGACTCCCAGGTCAGAGCTTTTAGACATACAAGTACCCTTGCTGCCATGAAGCTCATGACTGCTTTGGTGAATGTTGCCTTAAACCTCAGTATTCATCAGGACAATACACAGAGACAGTATGAAGCTGAGAGAAATAAAATGATTGGGAAGAGAGCCAATGAAAGATTGGAGTTACTACTTCAAAAACGGAAAGAGCTACAAGAAAATCAGGATGAAATTGAAAATATGATGAATTCTATTTTTAAGGGTATATTTGTTCATAGATACCGTGATGCTATTGCTGAGATTAGAGCCATTTGTATTGAAGAGATTGGAGTATGGATGAAAATGTATAGTGATGCCTTCCTAAATGACAGTTACCTAAAATATGTTGGCTGGACTCTTCATGACAGGCAAGGGGAAGTCAGGCTAAAGTGTTTGAAAGCCCTACAGAGCCTATATACCAATAGAGAATTATTCCCCAAATTGGAGCTGTTCACTAACCGATTCAAGGATCGCATTGTATCAATGACACTTGATAAAGAATATGATGTTGCTGTAGAAGCTATTCGACTGGTTACTCTGATACTTCATGGAAGTGAAGAAGCCCTTTCTAATGAAGACTGTGAAAATGTTTACCATTTGGTATACTCAGCACATCGTCCTGTTGCTGTGGCAGCTGGAGAGTTCCTTCACAAAAAGTTGTTTAGCAGACATGACCCACAAGCAGAAGAAGCATTAGCAAAGAGGAGAGGAAGGAACAGTCCTAATGGGAACCTCATTAGGATGCTTGTTCTTTTTTTTCTTGAAAGTGAGTTACACGAACATGCAGCCTACTTGGTGGACAGTTTGTGGGAGAGCTCTCAAGAACTGTTGAAAGACTGGGAATGTATGACAGAGTTGCTATTAGAAGAACCTGTTCAAGGAGAGGAAGCTATGTCTGACCGTCAAGAGAGTGCACTAATAGAGCTAATGGTTTGTACAATACGTCAAGCTGCTGAAGCACATCCTCCAGTGGGAAGAGGTACCGGCAAGAGAGTCCTAACTGCCAAAGAAAGAAAAACTCAAATTGATGATAGAAACAAATTGACTGAGCATTTTATTATAACACTTCCTATGTTGTTATCAAAGTATTCTGCAGATGCGGAAAAGGTAGCAAACTTGCTACAAATTCCACAGTATTTTGATCTAGAAATCTACAGCACAGGTAGAATGGAAAAGCATCTGGATGCTTTGTTAAAACAGATTAAATTTGTTGTGGAGAAACATGTAGAATCAGATGTTCTAGAAGCCTGCAGTAAAACCTATAGCATCTTATGCAGTGAAGAATATACCATCCAGAACAGAGTTGACATAGCTCGGAGCCAGCTGATTGATGAGTTTGTAGACCGGTTCAATCATTCTGTGGAAGACCTGTTGCAAGAGGGTGAAGAAGCTGATGATGATGATATTTACAATGTTCTATCCACCTTAAAGCGATTAACTTCTTTCCATAATGCTCATGATCTCACAAAATGGGATCTGTTTGGTAATTGCTACAGATTATTGAAGACTGGAATTGAACATGGAGCTATGCCAGAACAGATAGTCGTACAGGCACTGCAATGTTCCCATTACTCGATTCTTTGGCAGTTGGTGAAAATTACTGATGGTTCTCCTTCCAAAGAGGATTTGTTGGTATTGCGGAAAACAGTGAAATCCTTTTTGGCTGTTTGCCAACAGTGCCTATCTAATGTTAATACTCCAGTGAAAGAACAGGCTTTCATGTTACTCTGTGATCTATTGATGATTTTTAGCCACCAGTTAATGACAGGTGGCAGAGAGGGCCTTCAGCCTTTGGTGTTTAATCCAGATACAGGACTTCAGTCTGAACTGCTGAGTTTCGTGATGGATCATGTTTTCATTGACCAGGATGAGGAGAATCAGAGCATGGAGGGTGATGAAGAAGATGAAGCTAATAAAATCGAGGCCTTACATAAAAGAAGGAATCTACTTGCTGCCTTCAGCAAACTTATCATTTATGATATTGTTGACATGCATGCAGCTGCAGACATCTTTAAACACTACATGAAGTATTACAATGACTACGGTGATATTATTAAGGAAACACTAAGTAAAACCCGGCAGATTGATAAAATTCAGTGTGCCAAGACTCTCATTCTCAGTTTGCAGCAGTTGTTTAATGAACTTGTTCAAGAGCAAGGTCCCAACCTCGACAGGACATCTGCCCATGTCAGTGGCATTAAAGAATTGGCTCGGCGCTTTGCTCTTACATTTGGACTGGACCAAATCAAGACACGAGAAGCAGTCGCCACCCTTCACAAGGATGGCATAGAGTTTGCCTTTAAATACCAGAATCAGAAAGGACAAGAATATCCACCTCCTAACCTGGCTTTTCTTGAAGTACTAAGTGAATTTTCTTCTAAACTTCTCCGACAGGACAAAAAGACTGTTCATTCATACCTAGAGAAATTCCTTACTGAGCAGATGATGGAAAGGAGGGAAGATGTGTGGCTTCCACTCATCTCCTACAGAAATTCATTAGTCACTGGGGGTGAAGATGATAGAATGTCTGTGAACAGTGGAAGCAGCAGCAGCAAAACTTCCTCAGTAAGAAATAAGAAAGGACGACCTCCACTTCACAAAAAAAGAGTAGAAGATGAAAGTCTGGATAACACATGGCTAAACAGAACAGACACCATGATTCAGACTCCTGGCCCCCTGCCAGCCCCACAGCTTACTTCCACTGTGCTGCGAGACAATAGCCGGCCCTTGGGAGAACAGATTCAAGAACCTGAGTCTGAACATGGTTCTGAACCAGACTTTTTACACAATCCACAGATGCAGATCTCTTGGTTAGGCCAGCCGAAGTTAGAAGACCTGAATCGGAAGGACAGAACAGGAATGAACTACATGAAAGTGAGAACTGGAGTAAGGCATGCTGTTCGGGGTCTAATGGAAGAAGATGCTGAGCCCATCTTTGAAGATGTGATGATGTCATCCCGAAGCCAATTAGAAGATATGAATGAAGAATTTGAAGACACCATGGTTATTGATCTGCCTCCATCAAGAAATCGGCGAGAGAGAGCTGAACTGAGGCCAGACTTCTTTGACTCTGCAGCTATCATAGAAGATGATTCAGGATTTGGAATGCCTATGTTCTGA

Related Sequences

XP_004834338.1 Protein

Stag1 PREDICTED: cohesin subunit SA-1 isoform X3 [Heterocephalus glaber]

Length: 1258 aa      View alignments
>XP_004834338.1
MITSELPVLQDSTNETTAHSDAGSELEETEVKGKRKRGRPGRPPSTNKKPRKSPGEKSRIEAGVRGTGRGRANGHPQQNGEGEPVTLFEVVKLGKSAMQSVVDDWIESYKQDRDIALLDLINFFIQCSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSNFCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLVYSAHRPVAVAAGEFLHKKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEAMSDRQESALIELMVCTIRQAAEAHPPVGRGTGKRVLTAKERKTQIDDRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFDLEIYSTGRMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCSEEYTIQNRVDIARSQLIDEFVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFGNCYRLLKTGIEHGAMPEQIVVQALQCSHYSILWQLVKITDGSPSKEDLLVLRKTVKSFLAVCQQCLSNVNTPVKEQAFMLLCDLLMIFSHQLMTGGREGLQPLVFNPDTGLQSELLSFVMDHVFIDQDEENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHAAADIFKHYMKYYNDYGDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIKELARRFALTFGLDQIKTREAVATLHKDGIEFAFKYQNQKGQEYPPPNLAFLEVLSEFSSKLLRQDKKTVHSYLEKFLTEQMMERREDVWLPLISYRNSLVTGGEDDRMSVNSGSSSSKTSSVRNKKGRPPLHKKRVEDESLDNTWLNRTDTMIQTPGPLPAPQLTSTVLRDNSRPLGEQIQEPESEHGSEPDFLHNPQMQISWLGQPKLEDLNRKDRTGMNYMKVRTGVRHAVRGLMEEDAEPIFEDVMMSSRSQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAIIEDDSGFGMPMF