Sequence details NCBI ID: XM_004834274.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ephb1
Gene Name EPH receptor B1
Entrez Gene ID 101726285

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EPHB1 ENSCPOG00000002021 (Guinea pig)

Gene Details

EPH receptor B1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001828, Guinea pig)

Protein Percentage 92.67%
CDS Percentage 90.79%
Ka/Ks Ratio 0.16544 (Ka = 0.0498, Ks = 0.301)

EPHB1 ENSG00000154928 (Human)

Gene Details

EPH receptor B1

External Links

Gene Match (Ensembl Protein ID: ENSP00000381097, Human)

Protein Percentage 99.48%
CDS Percentage 93.66%
Ka/Ks Ratio 0.00742 (Ka = 0.0023, Ks = 0.3156)

Ephb1 ENSMUSG00000032537 (Mouse)

Gene Details

Eph receptor B1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000035129, Mouse)

Protein Percentage 99.38%
CDS Percentage 91.59%
Ka/Ks Ratio 0.0063 (Ka = 0.0028, Ks = 0.4487)

Ephb1 ENSRNOG00000007865 (Rat)

Gene Details

Eph receptor B1 (Ephb1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010634, Rat)

Protein Percentage 99.38%
CDS Percentage 91.93%
Ka/Ks Ratio 0.00676 (Ka = 0.0028, Ks = 0.419)

Genome Location

Sequence Coding sequence

Length: 2904 bp    Location: 11120486..11564972   Strand: +
Raw sequence   
>XM_004834274.1
ATGGAAGAGACGTTAATGGACACCAGGACGGCTACTGCAGAGCTGGGCTGGACAGCCAACCCTGCCTCCGGGTGGGAAGAAGTCAGTGGCTATGATGAAAACCTGAACACTATCCGCACCTACCAGGTGTGCAATGTCTTCGAGCCCAACCAGAACAACTGGCTGCTCACCACCTTCATCAACCGGCAGGGGGCCCATCGCATCTACACAGAGATGCGCTTCACTGTGAGAGACTGCAGCAGCCTCCCCAATGTCCCAGGCTCATGCAAGGAGACCTTCAACTTGTACTACTATGAGACTGACTCTGTCATTGCCACCAAGAAGTCAGCTTTCTGGTCTGAAGCCCCCTACCTCAAAGTAGACACCATTGCTGCAGATGAGAGTTTCTCCCAGGTGGACTTTGGGGGAAGGTTGATGAAGGTCAACACAGAAGTCAGGAGCTTTGGGCCTCTTACTCGAAATGGGTTTTATCTTGCCTTCCAGGATTATGGAGCCTGTATGTCTCTCCTTTCCGTCCGTGTCTTCTTCAAAAAGTGTCCCAGCATTGTGCAAAATTTTGCCGTGTTCCCAGAAACCATGACAGGGGCAGAGAGCACATCTCTGGTAATTGCTCGGGGCACATGCATCCCCAATGCGGAGGAAGTCGATGTGCCTATCAAACTCTACTGCAACGGGGATGGGGAGTGGATGGTGCCTATTGGCCGCTGCACCTGCAAGCCTGGCTATGAGCCTGAGAACAGCGTGGCCTGCAAGGCCTGTCCTGCAGGGACATTCAAGGCCAGCCAGGAAGCTGAGGGCTGCTCCCACTGCCCCTCCAACAGCCGCTCTCCTTCAGAGGCATCTCCCATCTGCACCTGCCGGACTGGCTATTACCGAGCGGATTTTGACCCCCCGGAAGTGGCATGCACTAGTGTTCCATCAGGTCCCCGCAATGTCATCTCCATTGTCAATGAGACATCCATCATTCTGGAGTGGCATCCCCCAAGGGAAACTGGTGGGCGGGACGATGTGACCTACAACATCATATGCAAAAAATGCCGGGCAGATCGCCGGAGCTGCTCCCGGTGTGATGACAACGTGGAGTTTGTGCCCAGACAGCTGGGTCTGACTGAATGTCGCGTCTCCATCAGCAGCCTGTGGGCTCACACCCCCTACACCTTTGACATCCAGGCCATCAATGGAGTCTCTAGCAAGAGCCCCTTCCCTCCACAGCATGTCTCCGTCAACATCACCACAAACCAAGCCGCCCCCTCCACTGTTCCTATCATGCACCAGGTCAGTGCTACCATGAGGAGCATCACTTTGTCATGGCCACAGCCGGAGCAGCCCAATGGCATCATCCTGGACTATGAGATCCGGTACTATGAGAAGGAGCACAATGAGTTCAACTCCTCCATGGCCAGGAGCCAGACCAACACAGCCCGCATCGACGGGCTGCGGCCCGGCATGGTATATGTGGTGCAGGTGCGTGCCCGCACAGTGGCTGGCTATGGCAAGTTCAGTGGCAAGATGTGTTTCCAGACTCTGACAGATGATGATTACAAGTCGGAACTGAGGGAGCAGTTGCCCCTGATTGCTGGCTCAGCAGCAGCTGGGGTCGTGTTTGTCGTGTCCTTGGTGGCCATCTCCATCGTCTGCAGCAGGAAACGAGCTTATAGCAAAGAGGCTGTGTACAGTGACAAACTTCAGCATTACAGCACAGGCCGAGGCTCCCCAGGGATGAAGATCTACATTGACCCCTTCACTTATGAGGACCCCAACGAAGCTGTCCGGGAGTTTGCCAAGGAAATTGATGTATCTTTTGTGAAAATTGAAGAGGTCATCGGAGCAGGAGAGTTTGGAGAGGTATACAAGGGGCGTTTGAAACTGCCAGGCAAGAGGGAAATCTACGTGGCCATCAAGACCCTGAAGGCTGGGTACTCAGAGAAGCAGCGTCGGGATTTTCTGAGTGAGGCAAGCATCATGGGCCAATTTGATCATCCCAACATTATTCGCTTGGAGGGTGTTGTCACCAAGAGTCGGCCGGTCATGATCATCACAGAGTTCATGGAGAATGGTGCTTTGGATTCTTTCCTCAGGCAAAATGATGGGCAGTTCACAGTGATCCAACTGGTGGGTATGCTCAGAGGCATCGCTGCTGGTATGAAGTATCTGTCTGAGATGAATTACGTTCACCGGGACCTGGCTGCAAGGAACATCCTAGTCAACAGTAACCTGGTGTGCAAGGTGTCTGACTTTGGCCTCTCCCGCTACCTCCAGGATGACACCTCAGACCCCACCTACACCAGCTCCTTGGGAGGGAAGATTCCTGTGAGATGGACAGCACCAGAGGCCATTGCCTACCGCAAATTCACTTCAGCCAGTGATGTCTGGAGCTACGGGATTGTCATGTGGGAAGTCATGTCATTTGGAGAGAGACCCTACTGGGATATGTCCAACCAAGATGTCATCAATGCCATTGAGCAGGACTATCGGCTGCCCCCTCCCATGGACTGCCCAGCTGCTCTCCACCAGCTCATGCTGGACTGTTGGCAGAAGGACCGGAATAGCCGACCCCGCTTTGCAGAGATCGTCAACACCCTGGACAAGATGATCCGGAACCCGGCAAGTCTCAAGACTGTGGCAACCATCACCGCCGTGCCTTCCCAGCCCCTGCTTGACCGCTCCATCCCAGACTTCACGGCCTTTACTACCGTGGATGACTGGCTTAGTGCCATCAAAATGGTCCAGTACAGGGACAGCTTCCTCACTGCTGGCTTCACCTCCCTTCAGCTGGTCACCCAGATGACATCAGAAGACCTCCTGAGAATAGGGGTCACCTTGGCAGGCCATCAGAAGAAGATCCTGAACAGCATCCATTCAATGAGAGTCCAGATGAGTCAGTCACCAACGGCCATGGCATGA

Related Sequences

XP_004834331.1 Protein

Ephb1 PREDICTED: ephrin type-B receptor 1 [Heterocephalus glaber]

Length: 967 aa      View alignments
>XP_004834331.1
MEETLMDTRTATAELGWTANPASGWEEVSGYDENLNTIRTYQVCNVFEPNQNNWLLTTFINRQGAHRIYTEMRFTVRDCSSLPNVPGSCKETFNLYYYETDSVIATKKSAFWSEAPYLKVDTIAADESFSQVDFGGRLMKVNTEVRSFGPLTRNGFYLAFQDYGACMSLLSVRVFFKKCPSIVQNFAVFPETMTGAESTSLVIARGTCIPNAEEVDVPIKLYCNGDGEWMVPIGRCTCKPGYEPENSVACKACPAGTFKASQEAEGCSHCPSNSRSPSEASPICTCRTGYYRADFDPPEVACTSVPSGPRNVISIVNETSIILEWHPPRETGGRDDVTYNIICKKCRADRRSCSRCDDNVEFVPRQLGLTECRVSISSLWAHTPYTFDIQAINGVSSKSPFPPQHVSVNITTNQAAPSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDDDYKSELREQLPLIAGSAAAGVVFVVSLVAISIVCSRKRAYSKEAVYSDKLQHYSTGRGSPGMKIYIDPFTYEDPNEAVREFAKEIDVSFVKIEEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPMDCPAALHQLMLDCWQKDRNSRPRFAEIVNTLDKMIRNPASLKTVATITAVPSQPLLDRSIPDFTAFTTVDDWLSAIKMVQYRDSFLTAGFTSLQLVTQMTSEDLLRIGVTLAGHQKKILNSIHSMRVQMSQSPTAMA