Details from NCBI annotation

Gene Symbol Poc1a
Gene Name POC1 centriolar protein homolog A (Chlamydomonas), transcript variant X3
Entrez Gene ID 101700310

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

POC1A ENSCPOG00000006740 (Guinea pig)

Gene Details

POC1 centriolar protein A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006072, Guinea pig)

Protein Percentage 92.18%
CDS Percentage 89.89%
Ka/Ks Ratio 0.18038 (Ka = 0.0533, Ks = 0.2954)

POC1A ENSG00000164087 (Human)

Gene Details

POC1 centriolar protein A

External Links

Gene Match (Ensembl Protein ID: ENSP00000296484, Human)

Protein Percentage 91.89%
CDS Percentage 90.99%
Ka/Ks Ratio 0.15771 (Ka = 0.0435, Ks = 0.2757)

Poc1a ENSMUSG00000023345 (Mouse)

Gene Details

POC1 centriolar protein homolog A (Chlamydomonas)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000072064, Mouse)

Protein Percentage 89.88%
CDS Percentage 88.72%
Ka/Ks Ratio 0.13696 (Ka = 0.0528, Ks = 0.3854)

Poc1a ENSRNOG00000037295 (Rat)

Gene Details

POC1 centriolar protein homolog A (Chlamydomonas) (Poc1a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000038175, Rat)

Protein Percentage 90.15%
CDS Percentage 87.46%
Ka/Ks Ratio 0.11486 (Ka = 0.056, Ks = 0.4875)

Genome Location

Sequence Coding sequence

Length: 1338 bp    Location: 5959126..5883137   Strand: -
>XM_004834196.1
ATGGCCGCGGCCTGCCTGGTGAGTTCTTTTAGGGGTGGCCGCCTGGGCCCCTGTCTGCCCTCTGGGACGTTGGGCGCTTGGCCGACCGGAGCGGTGAATTCGAGAGGACGAGGCAGTCCACTCCACGCTAGGGAGGATCCCTCATTGGAGAGGCATTTTAAGGGCCACCGAGATGCGGTTACCTGTGTGGACTTCAGTCTCAATACAAAGCAGCTGGCCAGTGGCTCCATGGATTCCTGCCTCATGGTCTGGCACATGAAGCCCCAGGCACGTGCCTACCGCTTCACAGGCCACAAGGATGCTGTCACCTGTGTGAACTTCTCTCCCTCGGGACATTTACTTGCCTCAGGCTCCCGTGACAAGACTGTCCGCATCTGGGTACCCAACGTCAAAGGCGAGTCCACTATGTTTCGTGCACACACAGCCACAGTGAGGAGTGTCCACTTCTCCAGTGATGGCCAGTCCCTTGTGACAGCCTCTGATGACAAGACAATCAAGGTGTGGTCAACACATCGCCAGAGATTCCTGTTCTCATTGAGCCAGCACATCAACTGGGTCCGCTGTGCCAGGTTCTCCCCTGATGGGCGGCTCATCGTGTCTGCCAGTGATGACAAGACCGTCAAGCTGTGGGACAAGACCAGCCGGGAGTGTGTCCACTCATACTGTGAGCATGGCGGCTTTGTCACCTATGTGGACTTCCATCCCAGTGGTACATGTGTTGCTGCTGCCGGCATGGACAACACTGTGAAGGTGTGGGATGTACGGACTCACCGGCTGTTGCAGCATTATCAGCTACACAGTGCAGCAGTAAATGCTCTCTCTTTCCACCCATCGGGAAACTACCTGGTTACAGCCTCCAGTGACTCAACCCTGAAGATCCTGGACCTGATGGAGGGCCGGCTGCTCTACACGCTCCATGGGCATCAGGGACCTGCCATCACTGTTGCCTTTTCAAGAACTGGGGAGTATTTTGCTTCTGGAGGCTCTGATGAACAGGTGATGGTTTGGAAGAGTAACTTTGATGTTGTTGATTATGGAGAAGTAATAGAAATGCCAAGGCCCCCAGCCACACTGGCCACCTCCGCAGGGAATCTGCCAGAAATGGATCTCCCCATGCCCCCAGGCAGAGGCAAGAGTCTGGAGTCTGTGCCAAGCCAGCCCCAGGAGCCCATCAGCATGCCCCAGACACTGACCAAGACGCTGGAGCACATCGTGGGCCAGCTGGACGTCCTCACTCAGACAGTGTCCATCCTGGAACAACGGTTGACACTGACAGAAGACAAGCTGAAGCAGTGTCTGGAGAACCAGCAGCTAATCATGCAGAGAGCAACACCATGA

Related Sequences

XP_004834253.1 Protein

Poc1a PREDICTED: POC1 centriolar protein homolog A isoform X3 [Heterocephalus glaber]

Length: 445 aa      View alignments
>XP_004834253.1
MAAACLVSSFRGGRLGPCLPSGTLGAWPTGAVNSRGRGSPLHAREDPSLERHFKGHRDAVTCVDFSLNTKQLASGSMDSCLMVWHMKPQARAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTMFRAHTATVRSVHFSSDGQSLVTASDDKTIKVWSTHRQRFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPAITVAFSRTGEYFASGGSDEQVMVWKSNFDVVDYGEVIEMPRPPATLATSAGNLPEMDLPMPPGRGKSLESVPSQPQEPISMPQTLTKTLEHIVGQLDVLTQTVSILEQRLTLTEDKLKQCLENQQLIMQRATP