Details from NCBI annotation

Gene Symbol Sema3b
Gene Name sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B, transcript variant X2
Entrez Gene ID 101699010

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000013277 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011953, Guinea pig)

Protein Percentage 91.18%
CDS Percentage 89.53%
Ka/Ks Ratio 0.12234 (Ka = 0.0457, Ks = 0.3738)

Sema3b ENSMUSG00000057969 (Mouse)

Gene Details

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099589, Mouse)

Protein Percentage 87.17%
CDS Percentage 82.75%
Ka/Ks Ratio 0.08475 (Ka = 0.0696, Ks = 0.8218)

Sema3b ENSRNOG00000016512 (Rat)

Gene Details

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B (Sema3b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060214, Rat)

Protein Percentage 87.57%
CDS Percentage 83.02%
Ka/Ks Ratio 0.08075 (Ka = 0.0674, Ks = 0.8352)

Genome Location

Sequence Coding sequence

Length: 2253 bp    Location: 4131051..4142374   Strand: +
>XM_004834092.1
ATGGGGCGTGCCGAGGCCGCCGCCATGATCCCAGGCCTGGCCCTGCTCTGGGCAGCGGGGCTGGGGCTAGCTACCTCCAGCCCTCCACGCCTTCGGCTCTCCTTTCAAGAGCTCCAGGCCTGGCATGGGCTCCAGAACTTCAGGCTGGAGCGGACCTGTTGCTATGAAGCCTTGCTGGTAGACGAGGAGCGTGGGCGCCTGTTTGTGGGTGCTGAGAACCATGTGGCCTCACTCAGCCTGGACAACATCAGCAAGCAGGCCAAAAAGCTGTCCTGGCCAGCCCCTGTGGAATGGCGGGAAGAGTGCAACTGGGCAGGGAAGGACATTGGTACTGAGTGCATGAACTTTGTGAAGTTGCTCCATCCCTACAACCACACACATGTGCTAGCCTGCGGCACAGGGGCCTTCCACCCCATCTGTGCATTTGTGGAAGTGGGCCACTGGCTGGAGGAACCCGTACTCTGGTTGGAACCAAGAAGGTTTGAGGATGGCAAGGGGAAGAGCCCCTATGACCCCAGGCATCGGGCAGCCTCCGTGCTGGTAGGGGAGGAGCTGTACTCAGGGGTAGCAGCAGACCTTATGGGCCGGGACTTTACCATCTTCCGCAGCCTGGGCCAACGACCAAGTCTCCGAACAGAGCCACACGATTCCCGCTGGCTCAACGAACCCAAGTTTGTCAAGGTCTTTTGGATCCCGGAGAGTGAGAACCCAGACGACGACAAAATCTACTTCTTCTTCCATGAGTTGGCAGTGGAGGCAGCACCAGTTCTGGGGCGCCTGACAGTGTCTCGAGTAGGCCAGATCTGTCGGAATGACATGGGTGGCCAGCGAAGCTTGGTTAATAAGTGGACGACATTCCTGAAAGCACGGCTGGTATGCTCCATGCCTGGTGTGGAAGGGGACAGTCACTTCGACCAGCTCCAGGATGTGTTTCTGCTGTCCTCTCGGGACCCCCGGAACCCGCTGCTCTACACTGTGTTTTCCACGTCCAGCATCTTCCAGGGCTCTGCTGTGTGCATGTACAGCATGAACGATGTGCGCCGGGCCTTCCTGGGACCCTTTGCACACAAGGAGGGGCCCACATACCAGTGGGTGTCCTACCAGGGCCGTGTCCCCTACCCCCGGCCTGGCATGTGCCCCAGCAAGACATTTGGCACCTTTAGTTCCACCAAGGACTTCCCTGACGACGTCATCCAGTTTGCTCGGAACCACCCTCTCATGTACAACCCCATCCTGCCCATTGGTGGGCGGCCTGTCTTCATGCAAGTGAGTGCCGGTTATACCTTCACTCAAATCGCTGTCGACCGTGTAGCAGCTGCTGATGGACACTATGACGTCCTCTTCATTGGTACAGATGTGGGAACAGTGCTAAAGGTGATCTCAGTCCCCAAGGGCAACCAGCCAAGTTCTGAGGGGCTGCTTCTGGAGGAGCTGCACGTGTTTGAGGACTCAGCTGCTGTCACCAGCATGCAAATCTCCTCCAAGAGGCACCAGCTGTACATAGCCTCGCGGAGCTCAGTGGCCCAGATCTCCTTGCATCGTTGTGCAGCCCATGGCCGCGCCTGCGCAGAATGCTGTTTGGCACGCGACCCCTACTGTGCCTGGGATGGGGCCAGGTGTACACGCTTCCAGCCTAGTGCCAAGAGGCGGTTCCGGCGGCAAGACATACGGAATGGCGACCCCAGCACGCTTTGCTCTGGGGACTCGTCCCGTCCTGTGCTGCTGGAGCGAAAGGTCTTCGGGGTGGAGGGCGGCAGCGCCTTCTTGGAGTGTGAGCCCCGCTCGCTGCAAGCACACATGGAGTGGACTTTCCAACGCACAGGGGAGGCTGCTCACGCCCAGGTGCCGGCGGAGGAGCGCGCTGAGAGCATGGGGCAGGGGCTACTGCTGCGTGGACTTCAGCGCCAGGACTCAGGCGTGTACCTGTGCACCGCCGTAGAGCAAGGCTTTTCGCAGCCACTCCGTCGCCTCGAGCTGCACGTTCTGACCGCTACGCAGGCTGAGCAGCTGGCGCGTGCCGAAGAGGCTGCGCCCCCAGCGCCCCCGGGCCCTAAACTGTGGTACCGAGACTTTCTGCAGCTGGTGGAGCCCGGCGGTGGTGGCGGCGGTGGCGCGAGCTCCCTGCGCATGTGCCGACCGCAGCCCTTGCTTCGAGTCCCGGGGTCCAAGTCGCGCCGGAAGGGCCGCAACCGGCGGATGCACGCTTCCGAGCCTCGTGCCGAGAGGGGGCCCCGCAGCGCAAAACACTGGTGA

Related Sequences

XP_004834149.1 Protein

Sema3b PREDICTED: semaphorin-3B isoform X2 [Heterocephalus glaber]

Length: 750 aa     
>XP_004834149.1
MGRAEAAAMIPGLALLWAAGLGLATSSPPRLRLSFQELQAWHGLQNFRLERTCCYEALLVDEERGRLFVGAENHVASLSLDNISKQAKKLSWPAPVEWREECNWAGKDIGTECMNFVKLLHPYNHTHVLACGTGAFHPICAFVEVGHWLEEPVLWLEPRRFEDGKGKSPYDPRHRAASVLVGEELYSGVAADLMGRDFTIFRSLGQRPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFHELAVEAAPVLGRLTVSRVGQICRNDMGGQRSLVNKWTTFLKARLVCSMPGVEGDSHFDQLQDVFLLSSRDPRNPLLYTVFSTSSIFQGSAVCMYSMNDVRRAFLGPFAHKEGPTYQWVSYQGRVPYPRPGMCPSKTFGTFSSTKDFPDDVIQFARNHPLMYNPILPIGGRPVFMQVSAGYTFTQIAVDRVAAADGHYDVLFIGTDVGTVLKVISVPKGNQPSSEGLLLEELHVFEDSAAVTSMQISSKRHQLYIASRSSVAQISLHRCAAHGRACAECCLARDPYCAWDGARCTRFQPSAKRRFRRQDIRNGDPSTLCSGDSSRPVLLERKVFGVEGGSAFLECEPRSLQAHMEWTFQRTGEAAHAQVPAEERAESMGQGLLLRGLQRQDSGVYLCTAVEQGFSQPLRRLELHVLTATQAEQLARAEEAAPPAPPGPKLWYRDFLQLVEPGGGGGGGASSLRMCRPQPLLRVPGSKSRRKGRNRRMHASEPRAERGPRSAKHW