Sequence details NCBI ID: XM_004834077.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rbm5
Gene Name RNA binding motif protein 5, transcript variant X5
Entrez Gene ID 101723983

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RBM5 ENSCPOG00000008151 (Guinea pig)

Gene Details

RNA binding motif protein 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007329, Guinea pig)

Protein Percentage 99.39%
CDS Percentage 95.99%
Ka/Ks Ratio 0.02751 (Ka = 0.0045, Ks = 0.1628)

RBM5 ENSG00000003756 (Human)

Gene Details

RNA binding motif protein 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000343054, Human)

Protein Percentage 98.77%
CDS Percentage 93.46%
Ka/Ks Ratio 0.02356 (Ka = 0.0064, Ks = 0.2714)

Rbm5 ENSMUSG00000032580 (Mouse)

Gene Details

RNA binding motif protein 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000138379, Mouse)

Protein Percentage 97.91%
CDS Percentage 91.9%
Ka/Ks Ratio 0.02907 (Ka = 0.0107, Ks = 0.3694)

Rbm5 ENSRNOG00000018153 (Rat)

Gene Details

RNA binding motif protein 5 (Rbm5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024529, Rat)

Protein Percentage 97.91%
CDS Percentage 92.07%
Ka/Ks Ratio 0.02983 (Ka = 0.0104, Ks = 0.3472)

Genome Location

Sequence Coding sequence

Length: 2451 bp    Location: 3969458..4000588   Strand: +
Raw sequence   
>XM_004834077.1
ATGGGTTCAGACAAGCGAGTGAGTAGAACAGAGCGTAGTGGAAGATACGGTTCCATCATAGACAGGGATGACCGTGATGAAAGAGAATCTAGAAGCAGACGGAGGGACTCTGATTACAAAAGATCTAGTGATGATCGAAGGGGTGATAGATACGATGACTACCGAGACTATGATAGTCCAGAGAGAGAGCGTGAAAGAAGGAACAGTGACCGATCTGAAGATGGCTACCATTCAGATGGTGACTATGGTGAACATGACTATAGGCATGACATCAGCGATGAGAGAGAGAGCAAGACCATCATGCTGCGCGGCCTTCCCATCACCATCACAGAGAGCGATATTCGAGAAATGATGGAGTCCTTTGAAGGCCCTCAGCCTGCAGATGTGAGGCTGATGAAGAGGAAAACAGGTGTAAGCCGTGGTTTCGCCTTCGTGGAGTTTTATCACTTGCAAGATGCTACCAGCTGGATGGAAGCCAATCAGAAAAAGTTGGTGATTCAAGGAAAGCACATTGCAATGCATTATAGCAATCCCAGACCTAAGTTTGAAGATTGGCTTTGTAATAAGTGCTGCCTGAACAATTTCAGGAAAAGACTGAAATGCTTCCGATGTGGAGCAGACAAGTTTGATTCTGAACAGGAAGTGCCCCCTGGAACCACAGAGTCAGTTCAGTCTGTAGATTACTACTGTGATACAATCATTCTTCGGAACATAGCTCCACATACTGTAGTGGATTCCATAATGACAGCACTATCTCCCTACGCATCCTTAGCTGTCAATAATATTCGTCTCATAAAAGACAAGCAAACCCAGCAGAACAGAGGCTTCGCATTTGTGCAGTTGTCTTCTGCAATGGATGCGTCTCAGCTGCTTCAGATATTACAGAGTCTCCATCCTCCTTTGAAAATTGATGGGAAAACTATTGGGGTTGATTTTGCAAAAAGTGCTAGAAAAGACTTGGTCCTCCCAGATGGCAACCGTGTCAGCGCCTTCTCTGTGGCTAGTACAGCCATTGCTGCTGCTCAGTGGTCGTCTACCCAGTCTCAAAGTGGTGAAGGAGGCAGTGTTGACTACAGTTACTTACAGCCAGGCCAAGATGGTTATGCGCAGTATGCACAGTACTCACAGGATTACCAGCAGTTTTATCAGCAACAAGCTGGAGGATTGGAATCTGATGTATCGTCTGTATCAGGTAGTAAATTGACCACCACCTCAGCAGCTGTAGTGTCCCAGAGTCCCCAGCTGTATAATCAGACCTCCAATCCACCTGGCTCTCCGACTGAGGAAGCACAGCCTAGCACTAGCACAAGTACACAGGCCCCAGCTGCTTCCCCCACTGGTGTAGTTCCTGGTACCAAATATGCGGTACCAGACACATCCACTTACCAGTATGATGAATCTTCAGGATATTATTATGATCCAACAACAGGGCTCTATTATGACCCCAACTCACAATACTACTATAATTCCTTAACACAGCAGTATCTTTATTGGGATGGAGAGAAGGAGACCTATGTGCCAGCTGCAGAGTCCAGTTCCCACCAGCAGACGGGCCTGCCTCCTGCAAAAGAGGGGAAAGAAAAGAAGGAAAAACCCAAGAGCAAAACAGCTCAGCAGATCGCCAAAGACATGGAACGCTGGGCTAAGAGTTTAAACAAGCAGAAAGAAAATTTTAAAAACAGCTTTCAACCTGTCAATTCATTGAGGGAAGAGGAAAGGAGAGAATCTGCTGCAGCAGATGCTGGCTTTGCTCTCTTTGAGAAAAAGGGAGCCTTAGCAGAAAGGCAGCAGCAGCTCATCCCAGAACTGGTGCGAAATGGAGATGAGGAGAATCCCCTCAAAAGAGGTCTGGTTGCTGCATATAGTGGTGACAGTGACAATGAAGAAGATCTGGTAGAGAGACTTGAGAGTGAAGAAGAGAAGCTTGCTGACTGGAAGAAGATGGCCTGTCTGCTCTGCCGTCGCCAGTTCCCAAACAGAGATGCCCTGATCAGGCACCAGCAGCTCTCTGACTTACACAAGCAAAACATGGACATATACCGACGATCCAGGCTGAGCGAGCAGGAGCTGGAAGCCTTGGAGCTGAGGGAGAGAGAGATGAAATACCGAGATAGAGCTGCAGAAAGACGAGAGAAGTATGGCATTCCAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCACTGTGAATTACGAGCAGCCTACCAAAGATGGCATTGACCACAGTAACATCGGCAACAAGATGCTGCAAGCCATGGGCTGGCGGGAAGGCTCAGGCTTGGGAAGAAAGTGTCAAGGTATCACAGCTCCCATTGAGGCCCAAGTCCGGCTGAAAGGAGCTGGCCTCGGAGCCAAAGGCAGTGCATACGGGTTGTCAGGTGCCGATTCCTACAAAGATGCTGTTCGGAAAGCCATGTTTGCTCGGTTTACTGAGATGGAGTGA

Related Sequences

XP_004834134.1 Protein

Rbm5 PREDICTED: RNA-binding protein 5 isoform X5 [Heterocephalus glaber]

Length: 816 aa      View alignments
>XP_004834134.1
MGSDKRVSRTERSGRYGSIIDRDDRDERESRSRRRDSDYKRSSDDRRGDRYDDYRDYDSPERERERRNSDRSEDGYHSDGDYGEHDYRHDISDERESKTIMLRGLPITITESDIREMMESFEGPQPADVRLMKRKTGVSRGFAFVEFYHLQDATSWMEANQKKLVIQGKHIAMHYSNPRPKFEDWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESVQSVDYYCDTIILRNIAPHTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLHPPLKIDGKTIGVDFAKSARKDLVLPDGNRVSAFSVASTAIAAAQWSSTQSQSGEGGSVDYSYLQPGQDGYAQYAQYSQDYQQFYQQQAGGLESDVSSVSGSKLTTTSAAVVSQSPQLYNQTSNPPGSPTEEAQPSTSTSTQAPAASPTGVVPGTKYAVPDTSTYQYDESSGYYYDPTTGLYYDPNSQYYYNSLTQQYLYWDGEKETYVPAAESSSHQQTGLPPAKEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFKNSFQPVNSLREEERRESAAADAGFALFEKKGALAERQQQLIPELVRNGDEENPLKRGLVAAYSGDSDNEEDLVERLESEEEKLADWKKMACLLCRRQFPNRDALIRHQQLSDLHKQNMDIYRRSRLSEQELEALELREREMKYRDRAAERREKYGIPEPPEPKRKKQFDAGTVNYEQPTKDGIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAKGSAYGLSGADSYKDAVRKAMFARFTEME