Sequence details NCBI ID: XM_004834047.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Mst1
Gene Name macrophage stimulating 1 (hepatocyte growth factor-like), transcript variant X2
Entrez Gene ID 101716165

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MST1 ENSCPOG00000011422 (Guinea pig)

Gene Details

macrophage stimulating 1 (hepatocyte growth factor-like)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010268, Guinea pig)

Protein Percentage 88.44%
CDS Percentage 88.63%
Ka/Ks Ratio 0.18113 (Ka = 0.0625, Ks = 0.3451)

MST1 ENSG00000173531 (Human)

Gene Details

macrophage stimulating 1 (hepatocyte growth factor-like)

External Links

Gene Match (Ensembl Protein ID: ENSP00000414287, Human)

Protein Percentage 84.53%
CDS Percentage 83.97%
Ka/Ks Ratio 0.15166 (Ka = 0.0896, Ks = 0.5911)

Mst1 ENSMUSG00000032591 (Mouse)

Gene Details

macrophage stimulating 1 (hepatocyte growth factor-like)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000035211, Mouse)

Protein Percentage 77.79%
CDS Percentage 79.52%
Ka/Ks Ratio 0.19064 (Ka = 0.1371, Ks = 0.7191)

Mst1 ENSRNOG00000019680 (Rat)

Gene Details

Macrophage stimulating 1 (hepatocyte growth factor-like) (Mst1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026711, Rat)

Protein Percentage 77.23%
CDS Percentage 79.0%
Ka/Ks Ratio 0.1891 (Ka = 0.1398, Ks = 0.7395)

Genome Location

Sequence Coding sequence

Length: 2163 bp    Location: 3617225..3612467   Strand: -
Raw sequence   
>XM_004834047.1
ATGGGGTGGCTCCCACTCCTGCTGCTTCTGACTCTATTCTTGGAGGCCCCTGGGCAGCGCTCGCCACTGAATGACTTCCAGGTGCTTCGGGGCACAGAGCTGCAGCACTTGCTACATGGAGTGGTGCTTGGGTCTTGGCAGAAAGATGTAGTAGATGCTGAAGAGTGTGCTAAGCTCTGTGGGCCCCTCCTGGACTGCCGTGCCTTTCACTACAACATGAGCAGCCTCAGCTGCCAACTGCTCCCATGGACCCAGCACTCGCCTCACACAGGGCTGCAGCGTTCTGCAGGCTGTGATCTCTTCCAGAAGAAAGACTATGTTCGGACATGCATTATGGACAATGGCGTCAGGTACCGGGGCACTGCAGCCAAGACAGTGGCTGGCCTGCCCTGCCAAAGCTGGAATCACAGGTTCCCCAATGACCACAAGTATAAACCCACACTCAGGAATGGCCTGGAAGAAAACTTCTGTCGCAATCCTGACAGGGACCCCAGAGGTCCTTGGTGCTACACAACAGACCCTACAGTGCGCTTCCAGAGCTGTGGCATCAAGTCTTGCAGGGAGGGTGCCTGCATTCGGTGCAATGGTGAGGATTATCGTGGTTCAGTGGACCACACAGAGTCAGGACTTGAGTGCCAGCGCTGGGACCTGCAGCACCCGCACGTGCATCCCTTTGAGCCTGCCAAATTCCTGGACAAGGATCTAGATGACAACTACTGCCGGAATCCTGATGGTTCTGAGCGGCCCTGGTGCTACACCACAGACCCACAGCTTGAGCGAGAATTCTGTGATCTCCCCAGCTGTGGGTCCGACCTGCCTCGGTCCACCCCAGGGTTGGAGGCACAACCACATCACGAGGCCAGGACTTTCCACTGCTTCCGAGGGAAGGGTGAGGGCTACCGGGGACTCGCCAACACCACCACCACGGGCGTGCCCTGCCAGCATTGGGATGCGCAGAGCCCACACCAGCACAGATTCCTGCCAGAGAAATATGTGTGCAAGGACCTCCGGGAAAACTTCTGCCGGAACCCTGATGGCTCGGAGGCGCCCTGGTGCTTCACATCCCGGCCTGGTATGCGGGTTGCCTTCTGCTACCAGATACCGCGCTGCACCGATGACATTCGCACAGAGGACTGCTACCATGGCTCAGGGGAGCAGTACCGAGGCTTTGTCAACAAGACCCGCAAGGGTGTCCCATGCCAGTCCTGGTCTGCACAAAGCCCACACAAGCCACTATTCACACCCACCTCTGCCCCATATGCTCAACTGGAGGAAAACTTCTGCCGGAACCCAGATGGGGATAGCCATGGGCCCTGGTGCTACACTACTGACCCAGGGACCTCCTTCGACTACTGTGCCCTGCAACGCTGCAATGATGACCCACCAAAGTCCATCCTGGACCCACCAGACCAGGTGCAGTTTGAGAAGTGTGGCAAGAGGGTGGACAGGCCAGACCAGTGGTTCTCCAAGCTACGCATAGTGGGGGGCCATCCTGGGAACTCACCTTGGACAGTCAGTTTGCACAACAGGCAAGGTCAGCATTTCTGCAGTGGGTCCCTAGTGAAGGAGCAGTGGGTACTGACAGCCCGGCAATGCTTCTCATCCTGCCATGCACCTCTCACGGGATATGAGGTGTGGCTGGGTACCCTGTTCCAGAACCCACAGCCTGGCGAGCCTGGCCTGCAGCAGGTCCCAGTGGCTAAGATGGTATGTGGGCCCTCAGATTCCCAGCTTGTCCTGCTCAAGCTGGAGAGACCTGTGACCCTAAACCAGCGAGTGGCCCTGATCTGCCTGCCCCCTGAGCGCTATGTGGTGCCTCCAAGAACCACGTGTGAGATTGCAGGCTGGGATGAGGCCAAAGGTACAAGTCATGACAGGGTCCTAAATGTGGCCTTGCTGAATGTCATCTCCAACCAGGAGTGTAACATCAAACACCGAGGGCGTGTACGAGAAAGTGAGATGTGTACCAGGAAACTGACGGCCCCTGTAGGAGCCTGTGAGGGTGACTACGGGGGCCCACTTGCCTGCTTTACCCATGACTGCTGGGTCCTGGAGGGAATTATAATCCCCAACCGAGTATGTGCACGGCCTGGATGGCCAGCCATCTTCCTGCGTGTCTCTGTGTTTGTGGACTGGATTCAGAAGGTCATGCAGCTGGGTTAG

Related Sequences

XP_004834104.1 Protein

Mst1 PREDICTED: hepatocyte growth factor-like protein isoform X2 [Heterocephalus glaber]

Length: 720 aa      View alignments
>XP_004834104.1
MGWLPLLLLLTLFLEAPGQRSPLNDFQVLRGTELQHLLHGVVLGSWQKDVVDAEECAKLCGPLLDCRAFHYNMSSLSCQLLPWTQHSPHTGLQRSAGCDLFQKKDYVRTCIMDNGVRYRGTAAKTVAGLPCQSWNHRFPNDHKYKPTLRNGLEENFCRNPDRDPRGPWCYTTDPTVRFQSCGIKSCREGACIRCNGEDYRGSVDHTESGLECQRWDLQHPHVHPFEPAKFLDKDLDDNYCRNPDGSERPWCYTTDPQLEREFCDLPSCGSDLPRSTPGLEAQPHHEARTFHCFRGKGEGYRGLANTTTTGVPCQHWDAQSPHQHRFLPEKYVCKDLRENFCRNPDGSEAPWCFTSRPGMRVAFCYQIPRCTDDIRTEDCYHGSGEQYRGFVNKTRKGVPCQSWSAQSPHKPLFTPTSAPYAQLEENFCRNPDGDSHGPWCYTTDPGTSFDYCALQRCNDDPPKSILDPPDQVQFEKCGKRVDRPDQWFSKLRIVGGHPGNSPWTVSLHNRQGQHFCSGSLVKEQWVLTARQCFSSCHAPLTGYEVWLGTLFQNPQPGEPGLQQVPVAKMVCGPSDSQLVLLKLERPVTLNQRVALICLPPERYVVPPRTTCEIAGWDEAKGTSHDRVLNVALLNVISNQECNIKHRGRVRESEMCTRKLTAPVGACEGDYGGPLACFTHDCWVLEGIIIPNRVCARPGWPAIFLRVSVFVDWIQKVMQLG