Details from NCBI annotation

Gene Symbol Nicn1
Gene Name nicolin 1, transcript variant X2
Entrez Gene ID 101713139

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NICN1 ENSCPOG00000019324 (Guinea pig)

Gene Details

nicolin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000021206, Guinea pig)

Protein Percentage 92.49%
CDS Percentage 92.02%
Ka/Ks Ratio 0.17483 (Ka = 0.0395, Ks = 0.2258)

NICN1 ENSG00000145029 (Human)

Gene Details

nicolin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000273598, Human)

Protein Percentage 90.61%
CDS Percentage 89.83%
Ka/Ks Ratio 0.14629 (Ka = 0.0476, Ks = 0.3251)

Nicn1 ENSMUSG00000032606 (Mouse)

Gene Details

nicolin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000035227, Mouse)

Protein Percentage 86.85%
CDS Percentage 84.98%
Ka/Ks Ratio 0.13621 (Ka = 0.0741, Ks = 0.5438)

Nicn1 ENSRNOG00000049083 (Rat)

Gene Details

nicolin 1 (Nicn1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066822, Rat)

Protein Percentage 86.38%
CDS Percentage 84.82%
Ka/Ks Ratio 0.14832 (Ka = 0.0799, Ks = 0.5385)

Genome Location

Sequence Coding sequence

Length: 642 bp    Location: 3377295..3372676   Strand: -
>XM_004834036.1
ATGTCCCGACTGTCGGTGCCCTGTCACGTGAAAGGCGCCGTAGCCCTGCAGGTGGGGGACATGCGGACTTTCCAAGGCCGGCCCGGTGTGGTGGTCATCGATGTCACCTTCCCTAGCATCGAGCCTTTTGAGTTGCAGGAGATCACATTTAAGAATTACTACACAGCCTTTTTGACCATCCGTGTCCGTCAGCATACCTCAGCACACACACCAGCTAAGTGGATGACCTGCCTACGAGACTGTTGTCTGATGCCTGATCCACACAGTGAGGATGGAGCCCAGGAGTATGTATCGCTATTCAAGCACCAGATGCTGTGTGACATGACTAGAGTACTGGAGCTGCGTCTGATTCTGCGGCAGCCGTCACCACTGTGGCTGTCTTTCACAGTGGAGGAGCTACAAATCTACCAGCAGGGACCAAAGAGCCCCTCTGTGACCTTTCCCAAGTGGCTCTCTCACCCGATGCCTTGTGAGCAGTCTGCCCTCCTTCTTGAGGGTCTCCCAGACCCCAGCAGGGTATCCTCTGAAGTGCAGCAGATGTGGGCGCTGACAGAGATGATCCGGGCCAGTCACACCTCCACAAGGATCGGCCGCTTTGATGTGGATGGCTGTTATGACCTGAACTTGCTCTCCTACACTTGA

Related Sequences

XP_004834093.1 Protein

Nicn1 PREDICTED: nicolin-1 isoform X2 [Heterocephalus glaber]

Length: 213 aa      View alignments
>XP_004834093.1
MSRLSVPCHVKGAVALQVGDMRTFQGRPGVVVIDVTFPSIEPFELQEITFKNYYTAFLTIRVRQHTSAHTPAKWMTCLRDCCLMPDPHSEDGAQEYVSLFKHQMLCDMTRVLELRLILRQPSPLWLSFTVEELQIYQQGPKSPSVTFPKWLSHPMPCEQSALLLEGLPDPSRVSSEVQQMWALTEMIRASHTSTRIGRFDVDGCYDLNLLSYT