Sequence details NCBI ID: XM_004833902.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rchy1
Gene Name ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase, transcript variant X3
Entrez Gene ID 101700191

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RCHY1 ENSCPOG00000022224 (Guinea pig)

Gene Details

ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018449, Guinea pig)

Protein Percentage 97.39%
CDS Percentage 93.9%
Ka/Ks Ratio 0.03349 (Ka = 0.0109, Ks = 0.3253)

RCHY1 ENSG00000163743 (Human)

Gene Details

ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSP00000321239, Human)

Protein Percentage 93.93%
CDS Percentage 90.65%
Ka/Ks Ratio 0.07258 (Ka = 0.031, Ks = 0.4269)

Rchy1 ENSMUSG00000029397 (Mouse)

Gene Details

ring finger and CHY zinc finger domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031345, Mouse)

Protein Percentage 90.19%
CDS Percentage 86.45%
Ka/Ks Ratio 0.08127 (Ka = 0.0509, Ks = 0.6258)

Rchy1 ENSRNOG00000002546 (Rat)

Gene Details

ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase (Rchy1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003470, Rat)

Protein Percentage 90.65%
CDS Percentage 85.83%
Ka/Ks Ratio 0.07193 (Ka = 0.0508, Ks = 0.7059)

Genome Location

Sequence Coding sequence

Length: 645 bp    Location: 322406..340573   Strand: +
Raw sequence   
>XM_004833902.1
ATGGCGGCGACTGCGTGCGAGACAAGGCGGCGGGGCTGCGAACACTATGACCGCGGGTGCCTGCTGAAGGCCCAACAGTCTTGTGAGGAATGTAGCACATTGTTTGGAGAATATTACTGCAGTATATGCCATCTGTTTGACAAAGATAAGAAGCAGTATCATTGTGAAAACTGTGGAATTTGTAGGATTGGTCCCAAGGAAGATTTTTTCCACTGTTTGAAATGTAACTTATGCCTAGCTATGAATCTTCAAGGAAAACATAAGTGTATTGAAAATGTTTCTCGGCAGAATTGTCCAATATGTTTGGAGGACATTCATACATCCCGTGTTGTTGCTCATGTCTTGCCATGTGGACATCTTTTACATAGAACGTGTTATGAAGAAATGTTGAAAAAAGGCTACCGGTGTCCGTTGTGCATGCACTCTGCCTTAGATATGACTTGGTACTGGAGACAGCTGGATAATGAGGTGGCACAGACTCCTATGCCGTCAGAATATCAGAACATGACTGTGGATATTCTCTGCAATGACTGCAATGGACGATCCACAGTCCAGTTCCATATTTTGGGCATGAAATGTCAGAATTGTGACTCTTACAATACTGCTCAAGCTGGAGGGCGTAGAATTTCACTGGATCAGCAATGA

Related Sequences

XP_004833959.1 Protein

Rchy1 PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 isoform X3 [Heterocephalus glaber]

Length: 214 aa      View alignments
>XP_004833959.1
MAATACETRRRGCEHYDRGCLLKAQQSCEECSTLFGEYYCSICHLFDKDKKQYHCENCGICRIGPKEDFFHCLKCNLCLAMNLQGKHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKKGYRCPLCMHSALDMTWYWRQLDNEVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKCQNCDSYNTAQAGGRRISLDQQ