Sequence details NCBI ID: XM_004921176.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101698587

Database interlinks

Part of NW_004624824.1 (Scaffold)

For more information consult the page for NW_004624824.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NUDT16L1 ENSCPOG00000000613 (Guinea pig)

Gene Details

nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000540, Guinea pig)

Protein Percentage 64.0%
CDS Percentage 68.83%
Ka/Ks Ratio 0.03542 (Ka = 0.2994, Ks = 8.4538)

NUDT16L1 ENSG00000168101 (Human)

Gene Details

nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000306670, Human)

Protein Percentage 62.44%
CDS Percentage 67.97%
Ka/Ks Ratio 0.03268 (Ka = 0.3055, Ks = 9.3487)

Nudt16l1 ENSMUSG00000022516 (Mouse)

Gene Details

nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000054201, Mouse)

Protein Percentage 61.95%
CDS Percentage 63.9%
Ka/Ks Ratio 0.0354 (Ka = 0.3411, Ks = 9.6365)

Nudt16l1 ENSRNOG00000003224 (Rat)

Gene Details

nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 (Nudt16l1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004314, Rat)

Protein Percentage 61.95%
CDS Percentage 63.58%
Ka/Ks Ratio 0.03261 (Ka = 0.3325, Ks = 10.196)

Genome Location

Sequence Coding sequence

Length: 660 bp    Location: 2476148..2477433   Strand: +
Raw sequence   
>XM_004921176.1
ATGCACCTAGACGGCGGGGCGGGGTGTGTCGATGTCCAACATGTCGGCTGCGCGGTTCCGGAGCTGAAGCGGATCAGCCGGGAAGAGGCGATGCGTCTGGGGCCAAGCTGGAGCCACTCGTGCCACGCCATGCTGTACGCCGCCAACCCCGGGCAGCTCTTCAGGCGCATCCCCTTGCGCTTCTCGCTGCTGATGCAGATACGCTTCGACGGGCTGCTGGGCTTCCCCGGGGGCTTCGTGGACTGGCGCTTCTGGTCGCTGGAGGACGGACTGAACCGANNGCTGGGCCTGGGCCGCCTGCGTCTCACCGAGGCCGACTATCTGAGCTCACACCTGACAGAGGGCCCGCACCGCGAAGTGGCGCATCTGTACGCTCAGCAGCTGACGCTGGAGCAACTGCATGCGGTGGAGATCAGCGCGGTGCACTCGTGGGACCACGGCTTGGAGGTGGAGCCCCCGCCCCCGCCCCAGGATTTGGCTCTGGCCTCGCGGAAGGCACCAATGGGTGCCGGGCCTTGTTCGTGTTCCTCTCTACACCCAAAAGGATCGAGTCGGAGGCTTTCCCAACTTCCTGAGCAACGCGTTTGTCAGCACCGCCAAGTGCCACCTCCTGTTTGCCCTCATGGTGCTCAATATAATGCCCTAGGAGAAGCTGGGTGA

Related Sequences

XP_004921233.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 [Heterocephalus glaber]

Length: 219 aa      View alignments
>XP_004921233.1
MHLDGGAGCVDVQHVGCAVPELKRISREEAMRLGPSWSHSCHAMLYAANPGQLFRRIPLRFSLLMQIRFDGLLGFPGGFVDWRFWSLEDGLNRXLGLGRLRLTEADYLSSHLTEGPHREVAHLYAQQLTLEQLHAVEISAVHSWDHGLEVEPPPPPQDLALASRKAPMGAGPCSCSSLHPKGSSRRLSQLPEQRVCQHRQVPPPVCPHGAQYNALGEAG