Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101724600

Database interlinks

Part of NW_004624793.1 (Scaffold)

For more information consult the page for NW_004624793.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

UPF3A ENSCPOG00000006824 (Guinea pig)

Gene Details

UPF3 regulator of nonsense transcripts homolog A (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006151, Guinea pig)

Protein Percentage 76.06%
CDS Percentage 82.46%
Ka/Ks Ratio 0.52662 (Ka = 0.1732, Ks = 0.3289)

UPF3A ENSG00000169062 (Human)

Gene Details

UPF3 regulator of nonsense transcripts homolog A (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSP00000364448, Human)

Protein Percentage 71.13%
CDS Percentage 77.91%
Ka/Ks Ratio 0.29459 (Ka = 0.1897, Ks = 0.6441)

Upf3a ENSMUSG00000038398 (Mouse)

Gene Details

UPF3 regulator of nonsense transcripts homolog A (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000037354, Mouse)

Protein Percentage 68.72%
CDS Percentage 72.91%
Ka/Ks Ratio 0.18938 (Ka = 0.2166, Ks = 1.1436)

Upf3a ENSRNOG00000017397 (Rat)

Gene Details

UPF3 regulator of nonsense transcripts homolog A (yeast) (Upf3a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060194, Rat)

Protein Percentage 71.11%
CDS Percentage 73.99%
Ka/Ks Ratio 0.15536 (Ka = 0.189, Ks = 1.2169)

Genome Location

Sequence Coding sequence

Length: 1302 bp    Location: 151727..136105   Strand: -
>XM_004921142.1
ATGAGGTCGGAGGAGACCTTCGGAGGTCTGAGTGCGGTGGTTACTGCTCAGAGTCCAGGCGGGCGGGAGAAGCTGTCGGCGGCGGAGGTCCAGTTCCACCGGGAATCTCCGCGGCGAGAACCTCGGACACCACCAGCGTCGTCCGGCTCTGGAGGAGGGACCGTCAAACCTCGCGAGGAGAAGAGGACGGTTCTGAGCAAGGTGGTCCTGCGGCGGCTGCCCCCCGGCCTCACTAAGGAGCAGCTGGAGGAGCAGCTGCGCCCGCTGCCCGCTCACGACTACTTCGAGGTGGCCGGCGCGGACCGCAGCCTTTATCCTCATCTCTACTCAAGAGCATACATTAATTTTAGGAATCCTGATGACATCCTTCTGTTCAGAGATCGTTTTGATGGATATGTCTTCATGAGCAGTAAAGGCCTGGAGTATCCTGCCGTGGTAGAGTTTGCTCCATTCCAGAAGATAGTCAGGAGGAAGCTGAAGAAGAGAGACAGCAAGACGGGGGGCATTGAAGACGATCCAGAGTATAAACAGTTTTTAGAAACTTACAGCATGGAAGAAGAGAGAACCAGTGCCAACCCTGAAATTCTTCTGGGAGAGATAGAGGCAAAGACGAGAGAACTTGTTGCTAGAAGAACCACACCTCTTTTGGACTATATTAAAAACAGAAAATTAGAAAAGCAGAGAATTCGAGAAGAGAAGCGAGAAGAACGAAGGAGGAGGGAGTTAGAAAAGAAACGCTTGCAGGAGGAGGAAAAAAGAAAAAGACGAGAAGAAGAAAGCTACAGGAGGAAAGAGGCAGATAAACAAAAGACAACTATGGAGACAGAAGTGAGGATAAAGCTTCTTAAGAAACCAGAAAAGGAAGAGGAACCAGACACAGAAAAACAAAAAGAAAGAGGCGAGGAAGTCAGCATTGGAGATGGAGAACAGGAAACCTGTGCCCCCTGCACCTTCGTGAGAGCCAGGCCTTCAGAGAGCCCAGTAGGGGTGCCCAGGGAGAAGTCCCATGATGACAATGACAAAGAGCAGAGGGACATGGAGAGAAGAATCCAAGGACCTGAAACACCAGAATGCCACTCAGATGATGTTAGAAAGCACAGTGGTCACTCTGAGTTTGACAGATTTCCTAGAAGGAATGAAGATGAGCTGAGATGGGGAGAGGGATTCATCCAAGACAGAGGGAAGAAGAAGAGCCAGGATGGGGGCATCCCTGTGGGGACAGCAGAGAGCCCTGCCAGGGAGCAGGAAGGGGCCTGCAGCCCGGCACTCGGAAGGGAGCGCCCAGGAAGTAGGGCCCTGTAA

Related Sequences

XP_004921199.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: UPF3 regulator of nonsense transcripts homolog A (yeast) [Heterocephalus glaber]

Length: 433 aa      View alignments
>XP_004921199.1
MRSEETFGGLSAVVTAQSPGGREKLSAAEVQFHRESPRREPRTPPASSGSGGGTVKPREEKRTVLSKVVLRRLPPGLTKEQLEEQLRPLPAHDYFEVAGADRSLYPHLYSRAYINFRNPDDILLFRDRFDGYVFMSSKGLEYPAVVEFAPFQKIVRRKLKKRDSKTGGIEDDPEYKQFLETYSMEEERTSANPEILLGEIEAKTRELVARRTTPLLDYIKNRKLEKQRIREEKREERRRRELEKKRLQEEEKRKRREEESYRRKEADKQKTTMETEVRIKLLKKPEKEEEPDTEKQKERGEEVSIGDGEQETCAPCTFVRARPSESPVGVPREKSHDDNDKEQRDMERRIQGPETPECHSDDVRKHSGHSEFDRFPRRNEDELRWGEGFIQDRGKKKSQDGGIPVGTAESPAREQEGACSPALGRERPGSRAL