Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101707878

Database interlinks

Part of NW_004624782.1 (Scaffold)

For more information consult the page for NW_004624782.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PDZD9 ENSCPOG00000006692 (Guinea pig)

Gene Details

PDZ domain containing 9

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006029, Guinea pig)

Protein Percentage 79.12%
CDS Percentage 87.18%
Ka/Ks Ratio 0.45024 (Ka = 0.1152, Ks = 0.2558)

PDZD9 ENSG00000155714 (Human)

Gene Details

PDZ domain containing 9

External Links

Gene Match (Ensembl Protein ID: ENSP00000441685, Human)

Protein Percentage 71.05%
CDS Percentage 80.35%
Ka/Ks Ratio 0.38323 (Ka = 0.1799, Ks = 0.4695)

Pdzd9 ENSMUSG00000030887 (Mouse)

Gene Details

PDZ domain containing 9

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033178, Mouse)

Protein Percentage 61.7%
CDS Percentage 73.58%
Ka/Ks Ratio 0.41041 (Ka = 0.2693, Ks = 0.6562)

Pdzd9 ENSRNOG00000016292 (Rat)

Gene Details

PDZ domain containing 9 (Pdzd9), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000049377, Rat)

Protein Percentage 60.64%
CDS Percentage 70.39%
Ka/Ks Ratio 0.34425 (Ka = 0.3011, Ks = 0.8748)

Genome Location

Sequence Coding sequence

Length: 576 bp    Location: 7441561..7429583   Strand: -
>XM_004921134.1
ATGGAGAAGGCCTCTGGAAAAAGCAAACATGGCGATGTTCTGATTAGTGTTGGTTATGCCAATGTGCTAGGTTATACACTTCAGAAATTTTTAAAGCTTTTGCAACACATCACCATAGGAACAGAGCTACAAATTCAGGTGTACCGAGATTTTATCGACATACCCCAAGAATGGCGAGAAATATATGATTTAATTCCTGAGAAAAACCCCCCAGTAACATTTAGCACACCAAAGTACACTGAGCAGACAAAAGATGATTCTGTTACCAGCAGTGATGACAATGAAGATGTAGTTTTAGAAAAAAAANNCCTTAATTATAGGTACCCACAGTCAACTGGGGTACAGCCTGCAAGGATACCAGTATCCACCTCCAGAGAATGGCATGAATATAAAAATAAGAACCACGCTATTCATGTTGGAAAAGACAGAAAGATAACGAGGGCCCCTTCTCCACACTGGACAATGGGAGAGCAAGACAATGACAGCTCCTCTTCCTCTGCTTCAGATGCATTTTGGCCAGAAGACTGTGCCCAAGCTGAGAAGGGCAAAGGTCAGCCAGTATCTAAAGTAGGTTAG

Related Sequences

XP_004921191.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: PDZ domain containing 9 [Heterocephalus glaber]

Length: 191 aa      View alignments
>XP_004921191.1
MEKASGKSKHGDVLISVGYANVLGYTLQKFLKLLQHITIGTELQIQVYRDFIDIPQEWREIYDLIPEKNPPVTFSTPKYTEQTKDDSVTSSDDNEDVVLEKKXLNYRYPQSTGVQPARIPVSTSREWHEYKNKNHAIHVGKDRKITRAPSPHWTMGEQDNDSSSSSASDAFWPEDCAQAEKGKGQPVSKVG