Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101713930

Database interlinks

Part of NW_004624754.1 (Scaffold)

For more information consult the page for NW_004624754.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SAPCD1 ENSCPOG00000024345 (Guinea pig)

Gene Details

suppressor APC domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014432, Guinea pig)

Protein Percentage 62.9%
CDS Percentage 69.89%
Ka/Ks Ratio 0.23142 (Ka = 0.2964, Ks = 1.281)

SAPCD1 ENSG00000228727 (Human)

Gene Details

suppressor APC domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000411948, Human)

Protein Percentage 70.97%
CDS Percentage 73.39%
Ka/Ks Ratio 0.30927 (Ka = 0.2485, Ks = 0.8034)

Sapcd1 ENSMUSG00000036185 (Mouse)

Gene Details

suppressor APC domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047448, Mouse)

Protein Percentage 64.52%
CDS Percentage 68.82%
Ka/Ks Ratio 0.16773 (Ka = 0.2899, Ks = 1.7286)

Sapcd1 ENSRNOG00000000858 (Rat)

Gene Details

suppressor APC domain containing 1 (Sapcd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001146, Rat)

Protein Percentage 64.52%
CDS Percentage 68.01%
Ka/Ks Ratio 0.17437 (Ka = 0.3054, Ks = 1.7511)

Genome Location

Sequence Coding sequence

Length: 384 bp    Location: 24453681..24451907   Strand: -
>XM_004921092.1
ATGGGCTGGAGGGGGCTCAAGGGGTCACCCCTGGCTCCGGCTCCCTACACAGTTCTGCTGCTGCCANCTGGGACAAGCCGCCAAGACCCGGGGGCCCAGAACTTCTTCCTCTGGCTGCAGAGGATGCAGGCCCTGGAGAGAGAGCAGGATGCCCTGTGGCAGGGGCTGGAGCTGCTGGAGCACGGGCCAGGCCTGGTTCCAAGACCGTCTGAACTGAGGGAGGCTCAGCGACAGACAGCAGCTTTTCTGGGGGCCCCGGGAGAAAATTTCCTANNTGATTCACACCCAGAGCCCGGCGGCCCCCAGTTAGCCCAGATTCACAAGGTGAATGTCTGTTTGCAGAATCTGATCCAAGGGAAAGTGAGTTTATTATTTTTAGTTTAG

Related Sequences

XP_004921149.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: suppressor APC domain containing 1 [Heterocephalus glaber]

Length: 127 aa      View alignments
>XP_004921149.1
MGWRGLKGSPLAPAPYTVLLLPXGTSRQDPGAQNFFLWLQRMQALEREQDALWQGLELLEHGPGLVPRPSELREAQRQTAAFLGAPGENFLXDSHPEPGGPQLAQIHKVNVCLQNLIQGKVSLLFLV