Details from NCBI annotation
| Gene Symbol |
unclassified transcription discrepancy |
|
Gene Name
|
mRNA |
| Entrez Gene ID |
101700518
|
Database interlinks
Part of NW_004624749.1 (SequenceType object (1))
Potential Gene Matches
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
Gene Details
septin 10
External Links
Gene Match(Ensembl Protein ID:ENSCPOP00000004086, Guinea pig)
| Protein Percentage |
94.74% |
| CDS Percentage |
92.9% |
| Ka/Ks Ratio |
0.13544 (Ka = 0.03, Ks = 0.2217) |
Gene Details
septin 10
External Links
Gene Match(Ensembl Protein ID:ENSP00000380824, Human)
| Protein Percentage |
86.56% |
| CDS Percentage |
87.52% |
| Ka/Ks Ratio |
0.19384 (Ka = 0.0745, Ks = 0.3845) |
Gene Details
septin 10
External Links
Gene Match(Ensembl Protein ID:ENSMUSP00000129023, Mouse)
| Protein Percentage |
83.37% |
| CDS Percentage |
83.22% |
| Ka/Ks Ratio |
0.15457 (Ka = 0.0976, Ks = 0.6315) |
Gene Details
septin 10 (Sept10), mRNA
External Links
| Protein Percentage |
81.82% |
| CDS Percentage |
82.34% |
| Ka/Ks Ratio |
0.1946 (Ka = 0.1155, Ks = 0.5935) |
Sequence SequenceType object (2)
Length: 1425
bp
Location: 12392820..12336540
Strand: -
>XM_004921079.1
ATGGCCGCCACCGACGACGCGCGGCGTCGGCTGTTTCAATCTCACATGGCATCAAAGATTGCATCTATGGACTCACAAGTATCCAGTAGTGAACAGAGAAAAAGAGAAACTATTCGTTCCTTGACTATGTGTGGCCATGTTGGTTTTGAGAGTTTGCCTGATCAGCTTGTCAGTAGATCCATTCAGCAAGGCTTCTGTTTCAACATTCTCTGTGTGGGAGAAACTGGAATTGGAAAATCAACACTGATTAATACATTGTTTAATACTAATTTTGAAGAACATGAATGCTCACATTTTTGCCCAGATGTTAAACTTAAAGCTCAGACATATGAACTCCAGGAAAGTAATGTACGGTTAAAATTGACCATTGTGAATACAGTGGGATTTGGTGACCAAATAAATAAAGAAGAAAGCTACCAACCCATCGTTGACTACATAAATGCTCAGTTTGAGGCTTATCTCCAAGAAGAATTGAAGATCAAGCGCTCTCTCTTCAACTACCATGATTCTCGCATACATGTGTGCCTCTACTTCATCACCCCCACAGGCCACTCTCTGAAGACACTTGACCTCTTAACTATGAAGAACCTGGACAGCAAGGTTAACATTATACCAGTGATTGCTAAAGCCGATACAATTTCTAAAACTGAATTACAGAAGTTTAAGGTGAAGCTCATGAGTGAGTTGATCAGTAATGGTGTCCAGATATACCAGTTCCCAACAGATGATGAGACCATTGCCAAAATCAGTGCTGCAATGAATGAACATTTGCCGTTTGCTGTTGTGGGAAGTATGGATGAGGTTAAAGTTGGAAATAAGATGGTCAAAGCTCGCCAGTACCCTTGGGGTATTGTACAAGTGGAGAATGAAAACCACTGTGACTTTGTGAAGCTGCGAGAAATGCTCATCTGCATGAACATGGAGGACCTGCGGGAGCAGACGCACACCAGGCACTATGAGCTGTACCGGCGTTGCAAACTGGAGGAGATGGGCTTTACAGATGTGGGCCCTGAAAACAAGCCCATCAGTCTTCAAGAGACCTATGAAGCCAAAAGACATGAATTCCATGGTGAGCGTCAGAGGAAGGAAGAGGAAATGAAGCAGATGTTTGTACAGCGAGTAAAGGAGAAAGAAGCCATATTGAAAGAAGCTGAAAGAGAGCTGCAAGCCAAATTTGAGCACTTGAAACGAGTTCACCAAGAAGAGAGAATAAAGCTTGAAGAAAAGAGAAGAGTTTTGGAAGAAGAAATAATTGCTTTCTCTAAAAAGAAGGCCGCCTCGGAGATACTTCAGAACCAGTCTTTTCTGGCATCAGGTATCGGCATGNNAAGAAGGACAAGGACCGTAAAAACTCCAATTTTATGTAACACAGGAGTTCCAGAGTATAGAAGGCCATCACAAGCAAGAGTAAACTGTTACAAGTGA
Related Sequences
unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: septin 10 [Heterocephalus glaber]
Length: 474
aa
View alignments>XP_004921136.1
MAATDDARRRLFQSHMASKIASMDSQVSSSEQRKRETIRSLTMCGHVGFESLPDQLVSRSIQQGFCFNILCVGETGIGKSTLINTLFNTNFEEHECSHFCPDVKLKAQTYELQESNVRLKLTIVNTVGFGDQINKEESYQPIVDYINAQFEAYLQEELKIKRSLFNYHDSRIHVCLYFITPTGHSLKTLDLLTMKNLDSKVNIIPVIAKADTISKTELQKFKVKLMSELISNGVQIYQFPTDDETIAKISAAMNEHLPFAVVGSMDEVKVGNKMVKARQYPWGIVQVENENHCDFVKLREMLICMNMEDLREQTHTRHYELYRRCKLEEMGFTDVGPENKPISLQETYEAKRHEFHGERQRKEEEMKQMFVQRVKEKEAILKEAERELQAKFEHLKRVHQEERIKLEEKRRVLEEEIIAFSKKKAASEILQNQSFLASGIGMXRRTRTVKTPILCNTGVPEYRRPSQARVNCYK