Sequence details NCBI ID: XM_004921061.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101725477

Database interlinks

Part of NW_004624740.1 (Scaffold)

For more information consult the page for NW_004624740.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CDK13 ENSCPOG00000009938 (Guinea pig)

Gene Details

cyclin-dependent kinase 13

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008917, Guinea pig)

Protein Percentage 96.23%
CDS Percentage 95.13%
Ka/Ks Ratio 0.11709 (Ka = 0.0182, Ks = 0.1553)

CDK13 ENSG00000065883 (Human)

Gene Details

cyclin-dependent kinase 13

External Links

Gene Match (Ensembl Protein ID: ENSP00000181839, Human)

Protein Percentage 92.49%
CDS Percentage 90.08%
Ka/Ks Ratio 0.13122 (Ka = 0.0428, Ks = 0.326)

Cdk13 ENSMUSG00000041297 (Mouse)

Gene Details

cyclin-dependent kinase 13

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000036013, Mouse)

Protein Percentage 91.81%
CDS Percentage 88.19%
Ka/Ks Ratio 0.10638 (Ka = 0.0455, Ks = 0.4275)

Cdk13 ENSRNOG00000013620 (Rat)

Gene Details

cell division protein kinase 13 isoform 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018431, Rat)

Protein Percentage 89.2%
CDS Percentage 85.97%
Ka/Ks Ratio 0.1494 (Ka = 0.07, Ks = 0.4687)

Genome Location

Sequence Coding sequence

Length: 4083 bp    Location: 21202111..21103357   Strand: -
Raw sequence   
>XM_004921061.1
ATGCCGAGCAGCGCTGACCCCGCGCTGGGGGGCGGCGCGGGCCTGAGCTGGGCCGAGAAGAAGTTGGAGGAGCGCCGCAAGCGCCGGCGGTTCCTGTCCCCGCAGCAGCCGCCGCTGCTCCTGCCGCTCCTGCAGCCGCAGCTCCTGCAGCCGCCGCCGCCGCCGCCGCCTCTGCTCTTCCTGGCCGCGCCCGGCACGGCTGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCTCCGCGTCCTGCGCCTCCAAGGGCCGCGGCCGGCACGGCGATCGCGCCGAACCCGCCGAGAGCGGCAGCCGGAGCAGTAGCCGCGGGCGCCGCCGCAAGAGTGCCTCGGCCACGTCCAGTAGCGGCGGCCGTAAGGAGCGCGATTCCAAGGTGCGGCGCGGCCGCTCGCGCGCGGGCAAGGAGCCGCCGTCCGCCTACCGCGAGCCACCCAAGGCCTACCGTGACGACAAGGCCGAACCGCGCGCCTACCGCCGGCGGCCGCGCTCCCCCAGCCCGCCGGGCCGCGACGACAGCCCAGGCTCGCACCGCGCTGCCCCGGGCCCGCGGAGCCGCCGCTCGCCCAGCCCAGCCGGGGGCAGTCCCTACACGCGGCGGCCGCGCTCGCCCAGCCCCTACCGCCGGCGCTCGCGCAGCTACAGCCGCGCGTCCTCGTACGAGCGCGGCGGCGACGTGTCCCCCAGCCCCTACAGCGGCGGCAGCTGGCGGCGCTCGCGGAGCCCCTACAGCCCGGTGCTCAGACGGTCTGCCAAATCCCGAAGCAGAAGTCCATACTCATCTAGGCATTCAAGGTCTCGAAGCAGGCACAGATTGTCTAGATCCCGAAGTCGTCATTCTAGCATTTCTCCTAGCACACTGACTCTGAAGAGTAGCCTGGCTGCTGAGTTGAACAAGAATAAAAAAGCTCGTGCTGCAGAGGCAGCACGAGCTGCAGAGGCAGCAAAAGCTGCAGAGGCTGCCAAGGCTGCAGAGGCAGCTGCGAAAGCTGCAAAAGCCTCCAACACATCTACACCAACCAAGGGGAACACAGAAACCGGAGCCAGCTCATCACAAACCAACCACGTGAAGGATGTGAAGAAACTTAAAACCGAGCATGCGCCTTCTCCCTCAAGTGGTGGAACTTTAAAAAATGACAAGGCAAAATCAAAGCCACCTCTTCAGGTAACAAAGGTAGACAATAATTTGATTGTAGATAAAGCCACCAAGAAAACAGCTGTAATTGGGAAGGAGAGTAAATCTGCTGCTACAAAGGAGGAACCAGTATCTCTCAAAGAGAAAACCAAACCACTGACACCAAGTGTGGGAGCCAAGGAGAAGGAGCAACATGTGACTTTAGTGACCTCTACGCTCCCACCCTTACCATTGCCTCCCATGCTTCCTGAAGATAAAGATACAGATAGCTTAAGAGGAAGTATTTCAGTAAAAGCAGTTAAAAAAGAAGTAGAAAAGAAANNCAGATGTCTTCTTGCTGATTTAGCCCTGCCCTCTCACCTGCCTCCCAAGGGAGGAGAGGATCTTTCCAAGAGTCCAGAGGAAAAGAAAACTGCAACGCAGTTGCATAGTAAACGGAGACCTAAAATATGTGGGCCTCGCTATGGTGAAATCAAAGAAAAAGATATTGACTGGGGAAAGCGCTGCGTGGATAAATTTGATATCATCGGAATTATTGGAGAAGGTACTTACGGACAAGTTTACAAGGCCAGGGATAAAGACACTGGAGAAATGGTAGCCTTAAAAAAAGTACGTCTGGATAATGAAAAAGAAGGCTTTCCAATTACAGCAATTCGAGAAATTAAAATTCTCCGACAGCTTACCCACCAGAGTATTATCAATATGAAGGAAATAGTGACTGATAAAGAAGATGCTTTGAATTTTAAGAAGGACAAAGGTGCATTTTATCTGGTATTTGAGTACATGGACCATGACCTGATGGGACTGCTGGAATCAGGCTTGGTTCATTTTAATGAAAATCACATCAAGTCATTTATGAGACAACTCATGGAAGGTCTAGATTATTGTCATAAGAAGAATTTTTTGCATAGAGATATTAAGTGTTCAAATATCCTTCTAAACAATAGAGGGCAGATAAAACTTGCAGATTTTGGACTTGCTCGATTATATAGCTCAGAAGAAAGTCGACCGTATACTAACAAGGTCATCACTTTATGGTACCGCCCACCTGAGCTGCTGTTAGGAGAAGAACGATATACACCGGCTATTGATGTTTGGAGCTGTGGATGTATACTTGGTGAACTCTTCACTAAAAAACCAATATTTCAAGCAAATCAGGAACTTGCACAACTAGAATTAATAAGCCGTATATGTGGGAGTCCGTGTCCAGCAGTGTGGCCTGATGTAATCAAGCTACCATATTTCAACACTATGAAACCAAAGAAGCAATATCGCCGAAAGTTAAGAGAAGAGTTTGTTTTCATTCCTGCAGCTGCACTAGACTTATTTGATTACATGCTCGCCTTGGATCCTAGTAAGCGCTGCACTGCTGAGCAGGCTCTTCAGTGTGAGTTCCTACGAGATGTCGAACCCTCAAAAATGCCTCCACCAGACCTTCCTTTATGGCAAGATTGTCATGAGTTGTGGAGTAAAAAGCGAAGAAGACAGAAGCAGATGGGCATGACTGATGATGTTTCCACAATTAAGGCTCCCAGAAAGGACTTGTCTCTGGGTTTGGACGACAGCAGAACTAATACACCACAAGGTGTGCTGCCAGCTACACAGCTAAAATCTCAGGGCAACTCGAATGTAGCACCTGTAATAACAGGCCCTGGACAGCAGTTAAACCACAGTGAATTGGCAATTCTACTAAACCTACTACAGTCTAAAACAAGTATTAATATGGCTGATTTTGTCCAAGTGTTGAACATTAAGGTAAACTCTGAGACTCAACAGCAACTAAATAAAATAAACCTTCCTGCTGGAATTTTGGCAACAGGTGAAAAACAGACAGATCCATCAACACCACAGCAGGAGTCTTCGAAACCATTGGGAGGAATTCAGCCTTCTTCTCAGACTGTCCAGCCTAAAGTGGAGACTGATGCTGCCCAGGCGGCTGTGCAGAGTGCATTTGCAGTTCTGTTGACTCAGTTAATAAAGGCTCAGCAGTCAAAGCAGAAAGATGTGCTACTAGAAGAGAGGGAAAATGGTTCGGGACATGATGCATCATTACAACTCAGGCCACCTCCAGAACCTGGCACACCAGTATCGGGGCAAGATGACCTCATCCAGCACCAAGATAGGAGGAGATTGGAGCTAACACCAGAACCAGAGCGACCTCGGATTTTGCCTCCTGATCAACGACCTCCGGAGCCTCCTGAACCACCACCAGTCACCGAGGAAGATCTGGATTATCGGACAGAAAACCAGCATGTACCTACTACTAGTTCTTCATTAACTGACCCTCATGCTGGAGTGAAAGCAGCCCTGTTACAGCTGCTTGCTCAGCATCAGCCCCAGGAGGAGCCCAAACGAGAAGGTGGTATTGATTATTCAGCAGGAGACACTTACGTGCCTACTTCAGACTACAAGGACAGCTTTGGAACATCATCTTTCTCCTCTGCTCCTTATGTTAGCAGTGATGGTCTAGGAAGTAGTTCTGCTGCACCATTGGAACGACGTAGCTTCATTGGAAACTCAGATATTCCGTCTTTGGATAACTACAGTACTGCTTCATCTCATTCTGGTGGTCCACCTCAGCCTTCTGCCTTTTCTGAGTCATTTCCTAGTTCTGTAGCTGGATATGGAGACATTTACCTCAATGCCGGTCCCATGTTGTTCAGTGGAGACAAGGACCACAGATTTGAATATAGCCATGGTCCTATTGCAGTCCTGGCAAACAGCAGTGACCCTTCCACAGGGCCAGAGAGTACTCATCCTTTGCCAGCAAAGATGCACAACTATAACTATGGTGGTAATTTACAGGAAAATCCAGGCGGCCCAAGCCTCATGCATGGGCAGACCTGGACTTCCCCTGCCCAAGGCCCTGGATATTCACAAGGATACAGGGGACACATCGGCACATCAGCTGGCAGAGGTCGAGGCAGAGGGTTACCATATTGA

Related Sequences

XP_004921118.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: cyclin-dependent kinase 13 [Heterocephalus glaber]

Length: 1360 aa      View alignments
>XP_004921118.1
MPSSADPALGGGAGLSWAEKKLEERRKRRRFLSPQQPPLLLPLLQPQLLQPPPPPPPLLFLAAPGTAAAAAAAAAAASASCASKGRGRHGDRAEPAESGSRSSSRGRRRKSASATSSSGGRKERDSKVRRGRSRAGKEPPSAYREPPKAYRDDKAEPRAYRRRPRSPSPPGRDDSPGSHRAAPGPRSRRSPSPAGGSPYTRRPRSPSPYRRRSRSYSRASSYERGGDVSPSPYSGGSWRRSRSPYSPVLRRSAKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSISPSTLTLKSSLAAELNKNKKARAAEAARAAEAAKAAEAAKAAEAAAKAAKASNTSTPTKGNTETGASSSQTNHVKDVKKLKTEHAPSPSSGGTLKNDKAKSKPPLQVTKVDNNLIVDKATKKTAVIGKESKSAATKEEPVSLKEKTKPLTPSVGAKEKEQHVTLVTSTLPPLPLPPMLPEDKDTDSLRGSISVKAVKKEVEKKXRCLLADLALPSHLPPKGGEDLSKSPEEKKTATQLHSKRRPKICGPRYGEIKEKDIDWGKRCVDKFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLTHQSIINMKEIVTDKEDALNFKKDKGAFYLVFEYMDHDLMGLLESGLVHFNENHIKSFMRQLMEGLDYCHKKNFLHRDIKCSNILLNNRGQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRICGSPCPAVWPDVIKLPYFNTMKPKKQYRRKLREEFVFIPAAALDLFDYMLALDPSKRCTAEQALQCEFLRDVEPSKMPPPDLPLWQDCHELWSKKRRRQKQMGMTDDVSTIKAPRKDLSLGLDDSRTNTPQGVLPATQLKSQGNSNVAPVITGPGQQLNHSELAILLNLLQSKTSINMADFVQVLNIKVNSETQQQLNKINLPAGILATGEKQTDPSTPQQESSKPLGGIQPSSQTVQPKVETDAAQAAVQSAFAVLLTQLIKAQQSKQKDVLLEERENGSGHDASLQLRPPPEPGTPVSGQDDLIQHQDRRRLELTPEPERPRILPPDQRPPEPPEPPPVTEEDLDYRTENQHVPTTSSSLTDPHAGVKAALLQLLAQHQPQEEPKREGGIDYSAGDTYVPTSDYKDSFGTSSFSSAPYVSSDGLGSSSAAPLERRSFIGNSDIPSLDNYSTASSHSGGPPQPSAFSESFPSSVAGYGDIYLNAGPMLFSGDKDHRFEYSHGPIAVLANSSDPSTGPESTHPLPAKMHNYNYGGNLQENPGGPSLMHGQTWTSPAQGPGYSQGYRGHIGTSAGRGRGRGLPY