Sequence details NCBI ID: XM_004875403.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Scoc
Gene Name short coiled-coil protein
Entrez Gene ID 101722594

Database interlinks

Part of NW_004625006.1 (Scaffold)

For more information consult the page for NW_004625006.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SCOC ENSCPOG00000006961 (Guinea pig)

Gene Details

short coiled-coil protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006280, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 97.15%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1289)

Scoc ENSMUSG00000063253 (Mouse)

Gene Details

short coiled-coil protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000080221, Mouse)

Protein Percentage 100.0%
CDS Percentage 94.72%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.2574)

Scoc ENSRNOG00000003853 (Rat)

Gene Details

short coiled-coil protein (Scoc), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005124, Rat)

Protein Percentage 100.0%
CDS Percentage 93.9%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.3151)

Genome Location

Sequence Coding sequence

Length: 249 bp    Location: 15933..23559   Strand: +
Raw sequence   
>XM_004875403.1
ATGATGAATGCTGACATGGATGCAGTTGATGCTGAAAATCAGGTGGAACTGGAGGAAAAAACACGACTTATTAATCAAGTGTTGGAACTCCAACACACACTTGAAGATCTCTCTGCAAGAGTAGATGCAGTTAAGGAAGAAAATCTGAAGTTAAAATCAGAAAACCAAGTTCTTGGACAATATATAGAAAACCTCATGTCTGCTTCTAGTGTTTTTCAAACAACTGACACAAAAAGCAAAAGAAAGTAA

Related Sequences

XP_004875460.1 Protein

Scoc PREDICTED: short coiled-coil protein [Heterocephalus glaber]

Length: 82 aa      
>XP_004875460.1
MMNADMDAVDAENQVELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK