Details from NCBI annotation

Gene Symbol Clgn
Gene Name calmegin
Entrez Gene ID 101722239

Database interlinks

Part of NW_004625006.1 (Scaffold)

For more information consult the page for NW_004625006.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLGN ENSCPOG00000006963 (Guinea pig)

Gene Details

calmegin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006281, Guinea pig)

Protein Percentage 83.14%
CDS Percentage 90.03%
Ka/Ks Ratio 0.45599 (Ka = 0.0906, Ks = 0.1987)

CLGN ENSG00000153132 (Human)

Gene Details

calmegin

External Links

Gene Match (Ensembl Protein ID: ENSP00000326699, Human)

Protein Percentage 81.94%
CDS Percentage 89.11%
Ka/Ks Ratio 0.35767 (Ka = 0.0935, Ks = 0.2613)

Clgn ENSMUSG00000002190 (Mouse)

Gene Details

calmegin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002259, Mouse)

Protein Percentage 77.96%
CDS Percentage 80.65%
Ka/Ks Ratio 0.14411 (Ka = 0.1277, Ks = 0.8862)

Clgn ENSRNOG00000003755 (Rat)

Gene Details

calmegin (Clgn), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005071, Rat)

Protein Percentage 77.96%
CDS Percentage 79.55%
Ka/Ks Ratio 0.12939 (Ka = 0.1304, Ks = 1.0078)

Genome Location

Sequence Coding sequence

Length: 1830 bp    Location: 88814..29900   Strand: -
>XM_004875402.1
ATGTATTTCTCAGGCTTTGGACTATGTTTAGGTCTTCTATTCATCTCAGTCAATGCAAAATTTATGAATGATGGCGTTGAGATGGAAGACTTTGATGAAAATTCAGATGAGATCGATGTTGTTGAAGCTGAAAGTTCTTCAGAGATTAACTATAAGACACCTAAACCCGTAGGAGAAGTATATTTTACAGAAACTTTTGATAGTGGGAATTTGGCTGGGTGGGTCTTATCAAAAGCAAAGAAAGATGATATGGATGCTGTGATGTCTCTATATGATGGAAGATGGGAAATAGAAGAGTTGAAAGAAAACCAGGTACCTGGTGACAGAGGACTGGTATTGAAATCTAGAGCACAGCATCATGCAATATCGACTGTATTAGCAAAACCCTTTATTTTTACTGATAAACCTTTGGTAGTTCAATATGAAGTAAATTTTCAAGATGGTATTGATTGTGGAGGTGCATACATTAAACTCCTAACAGACACTGATGATTTGATTCTGGAAAACTTTTATGATAAAACACCTTATACCATTATGTTTGGACCAGATAAATGCGGAGAAGATTATAAACTTCATTTTATCTTCAGACATAAACATCCCAAAACTGGAGTTTTTGAAGAGAAACATGCCAAACCTCCAAATGTAGACCTTAAAAACTTCTTTACAGACAGGAAGACTCATCTTTATACCCTTGTAATGAATCCAGATGACACATTTGAAGTATTAATTGATCAAATAGTTGTAAACAAAGGAAATCTCTTAGAAGATGTGGTTCCTCCTGTCAATCCTCCCAGAGAAATTGATGATCCTAATGATAAAAAACCTGATGAATGGGATGAAAGACTAAAAATCCCTGATCCTGCTGCTGTCAAACCAGAAGATTGGGATGAAGATGAACCTGCCCAAATAGAAGACTCAAGTGTTGTTAAACCCGATGGTTGGCTTGATAATGAACCAAAATTTATCCCTAATCCTAATGCTGAAAAATCTGATGACTGGAATGAAGATATGGATGGAGAATGGGAGGCACTTCATGTCCCTAATCCAGCATGTCAGGTTGGATGTGGTGAGTGGAAACCTCCTCTGATAGATAACCCAAAATACAAAGGAGTATGGAAACCACCAATGATCAGTAATCCTAACTACCAGGGAATCTGGAGTCCTCAAAAAATTCCTAATCCAGATTATTTTGAAGATGACCATCCATTTCTTCTGACTTCTTTCAGTGCTCTTGGTTTAGAGCTTTGGTCTATGTCCTCTGAGATCTACTTTGATAATTTTATTATCTGTTCAGAAAAAGAAGTAGCAGATCACTGGGCTGAAGATAGCTGGAAATTAAAAGTACTGGTTGCAAATGCTAATGAGCCTGGTGTAGTTAAGCAGTTAATGGCAGCTGCTGAAGAGCACTTGTGGCTTTGGGTCATTTTCCTGGTAATAGCAATAATTCCAGTAATATTACTTACTTCATTTTGTTGGCCAAGAAAAGCAAAGAAAAAATATGAAGATACAGAGTATAAAAAAGAGGCCATATATAAACCACAAACTAAGGGAGCACTAGAGCAAGAAGTGAAGGAAGAAAAAGCAGCCCTGGAGAAGCCAGTGGACTTGCAGGAGGAAAACAAACAAAGTGATGGTGAAATTCTTGAAAAAGAAGAGGAATGTGAACCTGACCAAAAGAGTGAAGAAGTTGAAGTCATAGAAGGACACGATGAGGGGAATAAATCAAATAAGTCTGGATCAGAGGATGAGATGAAAGATGCAGATGAAAGCACAGTATCTAGAGATGGACCAATAAAGTCACTACGCAAAAGGAGAATACGAAAGGAATAA

Related Sequences

XP_004875459.1 Protein

Clgn PREDICTED: calmegin [Heterocephalus glaber]

Length: 609 aa      View alignments
>XP_004875459.1
MYFSGFGLCLGLLFISVNAKFMNDGVEMEDFDENSDEIDVVEAESSSEINYKTPKPVGEVYFTETFDSGNLAGWVLSKAKKDDMDAVMSLYDGRWEIEELKENQVPGDRGLVLKSRAQHHAISTVLAKPFIFTDKPLVVQYEVNFQDGIDCGGAYIKLLTDTDDLILENFYDKTPYTIMFGPDKCGEDYKLHFIFRHKHPKTGVFEEKHAKPPNVDLKNFFTDRKTHLYTLVMNPDDTFEVLIDQIVVNKGNLLEDVVPPVNPPREIDDPNDKKPDEWDERLKIPDPAAVKPEDWDEDEPAQIEDSSVVKPDGWLDNEPKFIPNPNAEKSDDWNEDMDGEWEALHVPNPACQVGCGEWKPPLIDNPKYKGVWKPPMISNPNYQGIWSPQKIPNPDYFEDDHPFLLTSFSALGLELWSMSSEIYFDNFIICSEKEVADHWAEDSWKLKVLVANANEPGVVKQLMAAAEEHLWLWVIFLVIAIIPVILLTSFCWPRKAKKKYEDTEYKKEAIYKPQTKGALEQEVKEEKAALEKPVDLQEENKQSDGEILEKEEECEPDQKSEEVEVIEGHDEGNKSNKSGSEDEMKDADESTVSRDGPIKSLRKRRIRKE