Details from NCBI annotation

Gene Symbol Podxl2
Gene Name podocalyxin-like 2, transcript variant X2
Entrez Gene ID 101706059

Database interlinks

Part of NW_004624974.1 (Scaffold)

For more information consult the page for NW_004624974.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PODXL2 ENSCPOG00000001424 (Guinea pig)

Gene Details

podocalyxin-like 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001288, Guinea pig)

Protein Percentage 90.32%
CDS Percentage 88.8%
Ka/Ks Ratio 0.08677 (Ka = 0.0469, Ks = 0.541)

PODXL2 ENSG00000114631 (Human)

Gene Details

podocalyxin-like 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000345359, Human)

Protein Percentage 79.17%
CDS Percentage 80.49%
Ka/Ks Ratio 0.12022 (Ka = 0.1269, Ks = 1.0559)

Podxl2 ENSMUSG00000033152 (Mouse)

Gene Details

podocalyxin-like 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000058985, Mouse)

Protein Percentage 75.56%
CDS Percentage 78.88%
Ka/Ks Ratio 0.13136 (Ka = 0.1443, Ks = 1.0986)

Podxl2 ENSRNOG00000016255 (Rat)

Gene Details

podocalyxin-like 2 (Podxl2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021826, Rat)

Protein Percentage 75.8%
CDS Percentage 78.74%
Ka/Ks Ratio 0.12548 (Ka = 0.1426, Ks = 1.1367)

Genome Location

Sequence Coding sequence

Length: 1638 bp    Location: 43580..76942   Strand: +
>XM_004875271.1
ATGGGCCTGGGGGCCGGCCTGGGCGCCCCTGGCTCGGGCTTCCCCAGCGAGGAGAGCGAGGAATCCCGCATCCTGCAGCCACCGCAGTATTTCTGGGAGGAGGAGGAAGAGCTGAACGAGTCCAGCCTGGACCTGGGACCCACCGCAGACTACGGCTTCCCGGACCTCACAGAGAAGGCAGGGCCATTGGACATGGATGACACTGGCCAGGCCTCGGAGCTGCCCAGCCTCCCCTCCACCGTGCCCAAGCTGAACCTGGTGGAGCCGCCCTGGCAGGTGCCTCTGGAAGAGGAGGAAGAGGAGGAAGAGAGTGAGAAGGAGGAGGTAGAGCAGGAAGAGGAGGAGGAGGAAGAGGAGCAGGAAGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGCTGCTGCCGGTAAGCGGGTCCCAGGAGGAAGCTACCACGCAGGCCCGAGACTTTGTTCCCAGCGGCAGCAGCCAGGCCCAGGGTGTCCCCGGTCAGAGGCACGAGGAATCTGGGGACCAGGCCGCGTCAGGCGTGGAGGTGGAGAACAGTGTGGAACCCAGCTCATCCCTGTCCTCAGTCATCTCAGGCACGGTGACCCCAGGGCCTCAGGACCTGTCCAGTCAGGAGGCCGAGGCCACCATGCTGCTGGCAGCTGGATCCCGGGTAGAGTTCAAGGTCCCACAAGAGGCCAGTGAGGAGGCCACTGTGGGAATCAGCGGAGAGCTGGCTTCATCCTTGTCCTCGGCTTCATTCCTGCAAACTGAGGCTCCCCACAGAGCTGAGGCCCTGGATGAGGGCCGCCTGTACCCCAGAACCCCTGCCCCTTCCCCATCTGCCCCCCGAGACTCTGCCCCGACGATGCTGTCCTCTGCCATCCTGGGGCAGGAAGGTCTCAGTCAGCAGCCCCCAAGACCAGCAGCCAAATCTCCATCCAGGTCACCCTGGGACTCCACTCAGGTGATCTGCAAGGACTGGAGCAACCTGGCAGGGAAGAACTACATCATTCTGAACATGACTGAGAACATAGACTGTGAGGTGTTCCGGCAGCACAGGGGGCTGCGGCTCCTGGCCTTGGTGGAGGAGGTGCTACCCCGCCACCGCCGCGGCCACCATGGAGACTGGCACATCTCCCTGAGCAAGCCCAGCGAGAAGGAACAGCACCTCCTGATGACACTGGTGGGCGACCAGGGGGTGGTGCCCACCCAAGATGTCCTTTCCATGCTGGGTGACATCCGCAGGAGTCTGGAGGAGATCGGAATCCAGAACTACTCTATGACCAGCAGCTGCCAGGCGAAGGCCACCCAGGTGCGCAGCGACTATGGGACGCTCTTTGTGGTGCTGGTGATCATCGGTGTCATCTGCTTCATCATCATTGTGCTGGGGCTGCTCTACAACTGCTGGCAGCGCCGGCTGCCCAAGCTCAAGCACGTGTCGCATGGCGAGGAGCTGCGCTTTGTGGAGAACGGCTGCCACGACAACCCCACGCTGGACGTGGCCAGCGACAGCCAGTCGGAGATGCAGGAAAAGCAGCCAAGCCTGAACGGCGGGGCGCTCAATGGACCAGGCAGCTGGAGCGCGCTCATGGGGGGCAAGCGCGACCCCGAGGACTCGGATGTGTTTGAGGAGGACACGCACCTGTGA

Related Sequences

XP_004875328.1 Protein

Podxl2 PREDICTED: podocalyxin-like protein 2 isoform X2 [Heterocephalus glaber]

Length: 545 aa      View alignments
>XP_004875328.1
MGLGAGLGAPGSGFPSEESEESRILQPPQYFWEEEEELNESSLDLGPTADYGFPDLTEKAGPLDMDDTGQASELPSLPSTVPKLNLVEPPWQVPLEEEEEEEESEKEEVEQEEEEEEEEQEEEEEEEEEEEELLPVSGSQEEATTQARDFVPSGSSQAQGVPGQRHEESGDQAASGVEVENSVEPSSSLSSVISGTVTPGPQDLSSQEAEATMLLAAGSRVEFKVPQEASEEATVGISGELASSLSSASFLQTEAPHRAEALDEGRLYPRTPAPSPSAPRDSAPTMLSSAILGQEGLSQQPPRPAAKSPSRSPWDSTQVICKDWSNLAGKNYIILNMTENIDCEVFRQHRGLRLLALVEEVLPRHRRGHHGDWHISLSKPSEKEQHLLMTLVGDQGVVPTQDVLSMLGDIRRSLEEIGIQNYSMTSSCQAKATQVRSDYGTLFVVLVIIGVICFIIIVLGLLYNCWQRRLPKLKHVSHGEELRFVENGCHDNPTLDVASDSQSEMQEKQPSLNGGALNGPGSWSALMGGKRDPEDSDVFEEDTHL