Details from NCBI annotation

Gene Symbol Cpsf3
Gene Name cleavage and polyadenylation specific factor 3, 73kDa, transcript variant X2
Entrez Gene ID 101721287

Database interlinks

Part of NW_004624969.1 (Scaffold)

For more information consult the page for NW_004624969.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CPSF3 ENSCPOG00000011299 (Guinea pig)

Gene Details

cleavage and polyadenylation specific factor 3, 73kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010160, Guinea pig)

Protein Percentage 98.1%
CDS Percentage 90.59%
Ka/Ks Ratio 0.01829 (Ka = 0.0103, Ks = 0.5624)

CPSF3 ENSG00000119203 (Human)

Gene Details

cleavage and polyadenylation specific factor 3, 73kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000238112, Human)

Protein Percentage 96.78%
CDS Percentage 85.19%
Ka/Ks Ratio 0.01846 (Ka = 0.0172, Ks = 0.932)

Cpsf3 ENSMUSG00000054309 (Mouse)

Gene Details

cleavage and polyadenylation specificity factor 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000068148, Mouse)

Protein Percentage 96.35%
CDS Percentage 85.58%
Ka/Ks Ratio 0.02172 (Ka = 0.0204, Ks = 0.9411)

Cpsf3 ENSRNOG00000007194 (Rat)

Gene Details

cleavage and polyadenylation specific factor 3, 73kDa (Cpsf3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009652, Rat)

Protein Percentage 96.2%
CDS Percentage 85.21%
Ka/Ks Ratio 0.0213 (Ka = 0.0213, Ks = 1.001)

Genome Location

Sequence Coding sequence

Length: 2079 bp    Location: 290489..265457   Strand: -
>XM_004875247.1
ATGTCTGCGATTCCTGCAGAAGAGAGTGACCAGTTGCTGATCCGACCCCTTGGCGCTGGGCAGGAAGTAGGACGGTCATGCATTATCCTAGAGTTCAAAGGAAGAAAAATAATGCTGGACTGTGGGATCCACCCTGGCCTGGAAGGAATGGATGCTCTTCCATACATCGATTTGATTGACCCTGCCGAGATTGATCTCCTGTTAATTAGTCATTTCCACTTGGATCACTGTGGTGCGTTGCCCTGGTTTCTGCAGAAGACAAGCTTCAAAGGAAGGACATTTATGACTCACGCCACCAAAGCCATTTACAGATGGCTTCTGTCGGATTACGTCAAAGTCAGCAACATATCAGCAGATGACATGCTCTACACCGAGACAGACCTGGAGGAGAGCATGGACAAAATCGAAACGATCAACTTTCACGAAGTGAAGGAGGTGGCGGGGATCAAGTTCTGGTGTTACCACGCCGGCCACGTGCTGGGAGCCGCCATGTTCATGATCGAGATCGCAGGCGTGAAGCTTTTGTACACAGGCGATTTCTCGAGGCAGGAAGACCGACACCTGATGGCAGCCGAAATCCCCAACATCAAGCCGGATATTCTGATCATCGAATCGACCTACGGGACCCACATCCATGAGAAGCGCGAGGAGCGAGAGGCGAGGTTCTGCAACACTGTTCACGACATCGTCAACAGGGGTGGCAGGGGCCTCATCCCTGTCTTCGCTCTCGGAAGGGCTCAGGAGCTGCTCCTGATTCTGGATGAGTACTGGCAGAACCACCCCGAGCTGCATGACATCCCCATCTACTACGCGTCATCCTTGGCCAAGAAGTGCATGGCAGTGTACCAGACCTACGTCCACGCCATGAACGACAAGATCCGGAAGCAGATCAATATCAACAACCCCTTTGTGTTCAAGCACATCAGTAACCTCAAGAGCATGGACCACTTCGATGACATCGGCCCCAGTGTCGTCATGGCCTCGCCAGGCATGATGCAGAGTGGCCTCTCCAGGGAGCTCTTCGAGAGCTGGTGCACTGACAAGAGGAACGGCGTCATCATTGCGGGGTACTGTGTGGAAGGGACGCTGGCCAAGCATATCATGTCTGAGCCCGAGGAAATCGCCACCATGTCTGGACAGAAGTTACCACTGAAAATGTCTGTTGACTACATTTCTTTCTCTGCTCACACAGATTACCAGCAAACCAGTGAATTTATCCGCGCTCTGAAACCCCCCCATGTGATTTTAGTCCATGGAGAGCAGAATGAGATGGCCAGGCTGAAAGCAGCACTCATTCGAGAGTATGAAGACAATGATGAGGTTCACATAGAGGTGCACAACCCTCGGAATACAGAGGCTGTGACCTTAAACTTCAGGGGAGAAAAACTAGCCAAGGTCATGGGCTTTTTAGCAGACAAAAAGCCAGAACAAGGCCAGCGGGTCTCAGGAATTCTTGTTAAGAGAAACTTCAATTATCACATCCTTTCTCCTTGTGACCTGTCCAATTACACCGACCTGGCCATGAGCACCGTGAAGCAGACCCAGGCCATCCCCTACACTGGGCCCTTCCACCTGCTGTCTTACCAGCTGCAGAAACTGACAGGTGACGTAGAAGAATTAGAAATTCAAGAAAAACCTGCTTTGAAAGTATTCAAAAATATTACCATAATACTGGAACCAGGCATGGTAATCCTAGAGTGGCTGGCGAACCCATCCAACGACATGTACGCGGACACAGTGACCACCGTGATCCTTGAGGTGCAGTCCAACCCGAAAATACGGAAAAGTGTGGCTCAGAAGGTTTCGAAGAAGCTGGAGACGCACATGTACAGCAAGCGCCTGGAGACTATGCTTCAGGACATATTTGGAGAAGACTGTGTGAGTATGAAAGACAGCTCCGTCCTCAGCGTCACCGTGGATGGGAAAACGGCCAACGTTAGCTTGGAGACCCGGAGCGTGGAGTGCGAGGAGGGCAGCGAGGACGACGAGTCGCTGCGGGAGATGGTGGAGCTGGCGGCGCAGCGCCTGTACGACGCGCTGACCCCGTGCGCAGAGGCAGAGCCGAGAGACCTCCCGTGA

Related Sequences

XP_004875304.1 Protein

Cpsf3 PREDICTED: cleavage and polyadenylation specificity factor subunit 3 isoform X2 [Heterocephalus glaber]

Length: 692 aa     
>XP_004875304.1
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVHAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEIATMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFHLLSYQLQKLTGDVEELEIQEKPALKVFKNITIILEPGMVILEWLANPSNDMYADTVTTVILEVQSNPKIRKSVAQKVSKKLETHMYSKRLETMLQDIFGEDCVSMKDSSVLSVTVDGKTANVSLETRSVECEEGSEDDESLREMVELAAQRLYDALTPCAEAEPRDLP