Details from NCBI annotation

Gene Symbol Trim41
Gene Name tripartite motif containing 41, transcript variant X2
Entrez Gene ID 101716177

Database interlinks

Part of NW_004624958.1 (Scaffold)

For more information consult the page for NW_004624958.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIM41 ENSCPOG00000022446 (Guinea pig)

Gene Details

tripartite motif containing 41

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014721, Guinea pig)

Protein Percentage 87.83%
CDS Percentage 87.46%
Ka/Ks Ratio 0.23548 (Ka = 0.0866, Ks = 0.3678)

TRIM41 ENSG00000146063 (Human)

Gene Details

tripartite motif containing 41

External Links

Gene Match (Ensembl Protein ID: ENSP00000320869, Human)

Protein Percentage 89.32%
CDS Percentage 87.54%
Ka/Ks Ratio 0.13822 (Ka = 0.0695, Ks = 0.503)

Trim41 ENSMUSG00000040365 (Mouse)

Gene Details

tripartite motif-containing 41

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000037055, Mouse)

Protein Percentage 87.66%
CDS Percentage 85.27%
Ka/Ks Ratio 0.14022 (Ka = 0.0815, Ks = 0.5816)

Trim41 ENSRNOG00000002388 (Rat)

Gene Details

tripartite motif-containing 41 (Trim41), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003246, Rat)

Protein Percentage 87.29%
CDS Percentage 84.47%
Ka/Ks Ratio 0.12873 (Ka = 0.0835, Ks = 0.6482)

Genome Location

Sequence Coding sequence

Length: 1653 bp    Location: 199193..187171   Strand: -
>XM_004875127.1
ATGGCTGCCGTTGCCATGACACCCAACCCTGTGCAGACCCTTCAGGAGGAGGCGGTGTGCGCCATCTGCCTCGATTACTTCACGGACCCGGTGTCCATCGGATGCGGGCACAACTTCTGCCGAGTGTGTGTAACCCAGTTGTGGGGCGGGGAAGATGAGGAGGACAGGGATGAGTTGGAGCGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGACGGAGAGGAGGAGGAAGTGGAGGCAGTGGGGGCCAGCGGGGGCTGGGACACTCCCATGCGGGAGGAAGATTTTGAAGGCGACATGGAGGAGGAGGTAGAAGAGGAAGAGGAGGGTGTGTTCTGGACCACTGGCATGGGTGGGTCCAACTGGGACAACATGGACTACGTGTGGGAGGAGGAGGACGAAGAGGAAGACCTGGACTACTATTTGGGGGACATGGAGGACCTGAGAGGGGAGGATGAGGAGGACGAGGAAGAAGTGCTGGAGGAGGATGAGGAAGAGGAGCTAGACCCCGTCACCCCACTGTCCCCACCTCCAGCCCCTCGGAGGTGCTTCACTTGTCCCCAGTGCCGGAAGAGCTTTCCTCGGCGGAGCTTCCGCCCCAACCTGCAGCTGGCCAACATGGTCCAGGTGATTCGGCAGATGCACCCAACCCCGGGGCGAGGGAGCCGCGTGAACGAGCAGGGTATCTGTCCGAAACACCAAGAAGCCCTGAAGCTATTCTGCGAAGTGGATGAAGAGGCCATCTGTGTAGTGTGCCGAGAATCCAGGAGCCACAAACAGCACAGTGTGGTGCCATTGGAAGAGGTGGTGCAGGAGTACAAGGCCAAGCTGCAGGGACATGTGGAACCCCTTAGGAAGCACCTGGAGGCTGTGCAGAAGATGAAGGCCAAGGAGGAAAGGCGAGTGACAGAGCTAAAGAGCCAGATGAAGTCAGAGCTGGCAGCTGTGGCCTCAGAGTTTGGGCGGCTAACACGGTTTCTGGCTGAAGAGCAGGCAGGGCTGGAGAGGCGCCTCCGAGAGATGCATGAAGCTCAGCTGGGGCATGCTGGCGCAGTGGCCAGCCGCCTCACAGAGCAGGCTGCCCAGCTGAGCCGCCTGCTGGCTGAGGCCCAGGAGAGGAGTCAGCAGGGGGGCCTTCGGCTACTCCAGGACATCAAGGAGACTTTCAATAGGTGTGAAGAGGTACAGCTGCAGCCCCCAGAGATCTGGTCCCCTGACCCATGCCAACCCCATAGCCATGACTTCCTGACAGATGCCATCGTGAGGAAAATGAGCCGGATGTTCTGTCAGGCTGCGAGAGTGGACCTGACGCTGGACCCTGACACGGCTCACCCTGCCCTGATGCTGTCCCCCGACCGCCGGGGTGTCCGCTTGGCAGAGCGGCGGCAGGAGGTTGCTGACCATCCCAAGCGCTTCTCGGCTGACTGCTGCGTACTGGGGGCCCAGGGCTTCCGCTCTGGCCGGCACTACTGGGAGGTAGAGGTGGAACCCTCCTGGCCTCCAGCTCTGCCTTTTCTCACCTACTGTGTCTGCCCAACAGGTCTGCATGGGTCTCTGATAATGAGAACAACTGCTTGGTTTTCCTTCCCTGTCTGCCTAGTCCAGTCCAGCCCTTGGGAGTTTCGAGTAGGAAAGATTGTAATTTGA

Related Sequences

XP_004875184.1 Protein

Trim41 PREDICTED: E3 ubiquitin-protein ligase TRIM41 isoform X2 [Heterocephalus glaber]

Length: 550 aa      View alignments
>XP_004875184.1
MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELEREEEEEEEEEEEEDGEEEEVEAVGASGGWDTPMREEDFEGDMEEEVEEEEEGVFWTTGMGGSNWDNMDYVWEEEDEEEDLDYYLGDMEDLRGEDEEDEEEVLEEDEEEELDPVTPLSPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVNEQGICPKHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKSQMKSELAAVASEFGRLTRFLAEEQAGLERRLREMHEAQLGHAGAVASRLTEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQLQPPEIWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVRLAERRQEVADHPKRFSADCCVLGAQGFRSGRHYWEVEVEPSWPPALPFLTYCVCPTGLHGSLIMRTTAWFSFPVCLVQSSPWEFRVGKIVI