Sequence details NCBI ID: XM_004875118.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pparg
Gene Name peroxisome proliferator-activated receptor gamma, transcript variant X6
Entrez Gene ID 101711078

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624956.1 (Scaffold)

For more information consult the page for NW_004624956.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PPARG ENSCPOG00000002043 (Guinea pig)

Gene Details

peroxisome proliferator-activated receptor gamma

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015389, Guinea pig)

Protein Percentage 96.21%
CDS Percentage 92.98%
Ka/Ks Ratio 0.04038 (Ka = 0.0161, Ks = 0.3997)

PPARG ENSG00000132170 (Human)

Gene Details

peroxisome proliferator-activated receptor gamma

External Links

Gene Match (Ensembl Protein ID: ENSP00000287820, Human)

Protein Percentage 96.21%
CDS Percentage 86.32%
Ka/Ks Ratio 0.0171 (Ka = 0.0178, Ks = 1.0405)

Pparg ENSMUSG00000000440 (Mouse)

Gene Details

peroxisome proliferator activated receptor gamma

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000000450, Mouse)

Protein Percentage 96.0%
CDS Percentage 86.74%
Ka/Ks Ratio 0.01966 (Ka = 0.0195, Ks = 0.9936)

Pparg ENSRNOG00000008839 (Rat)

Gene Details

peroxisome proliferator-activated receptor gamma (Pparg), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012137, Rat)

Protein Percentage 96.21%
CDS Percentage 86.95%
Ka/Ks Ratio 0.01817 (Ka = 0.0184, Ks = 1.0129)

Genome Location

Sequence Coding sequence

Length: 1428 bp    Location: 149081..84687   Strand: -
Raw sequence   
>XM_004875118.1
ATGGTCGACACCGAGATGCCATTCTGGCCCACCAACTTCGGGATCAGCTCCATGGACCTCTCCGCGATGGACGACCACTCGCACGCCTTTGACATCAAGCCCTTCACCACAGTCGACTTCTCCAGCATCTCGGCACCACACTATGAAGACATCCCATTCCCAAGGATGGACCCAATGGTCGCCGATTATAAATATGACCTGAAGTTCCAGGAGTACCAAAGTACCATCAAGGTGGAGCCCTCGTCGCCCCCGTACTATTCCGAGAAGTCCCAGCTGTACAACAGGCTCCCCGAGGAGCCCTCCAACTCCCTCATGGCCATCGAGTGCCGAGTGTGTGGAGACAAGGCCTCTGGCTTCCACTACGGAGTCCATGCCTGCGAAGGGTGTAAGGGTTTCTTCCGGAGGACCATCCGATTGAAGCTTATTTATGATAGGTGTGATCTTAACTGTCGGATCCACAAAAAGAGTAGAAATAAATGTCAGTACTGTCGATTTCAGAAGTGCCTCGCAGTGGGGATGTCTCATAACGCCATCAGGTTTGGGCGGATGCCACAGGCTGAGAAGGAGAAGCTGTTGGCCGAGATCTCCAGCGACATCGACCAGCTGACCCCAGAGTGTGCTGACCTCCGGGCGCTGGCCAAGCACTTGTATGACTCATACATCAAGTCCTTCCCTCTGACCAAAGCCAAGGCCCGAGCGATCCTGACAGGAAAGACGACGGACAAATCACCGTTTGTCATCTATGACATGAATTCCCTGATGATGGGTGAAGACAAGATCAAGTTCAAGCACATCACGCCCCTGCAGGAGCAGAGCAAGGAGGTGGCAATCCGCATCTTCCAGGGCTGCCAGTTCCGCTCAGTGGAGGCCGTGCAGGAGATCACCGAGTACGCCAAGAGCATCCCGGGCTTCGTGGGCCTGGACCTCAATGACCAGGTGACCCTGCTCAAGTACGGCGTGCACGAGATCATCTACACCATGCTGGCCTCGCTGATGAACAAGGACGGCGTGCTCATCTCCGAGGGCCAGGGCTTCATGACGCGGGAGTTTCTCAAGAGCCTGCGGAAGCCCTTCGGTGACTTTATGGAGCCCAAGTTTGAGTTCGCTGTGAAGTTCAACGCACTGGAACTGGACGACAGCGACCTGGCCATATTTATAGCCGTCATCATCCTCAGTGGAGACCGCCCGGGCCTGCTGAATGTGAAGCCCATTGAGGACATTCAGGACAACCTGCTGCAAGCCCTGGAGCTCCAGCTCAAGCTCAACCACCCGGAGTCCTCGCAGCTGTTCGCCAAGCTGCTGCAGAAGATGACAGACCTCAGGCAGATCGTCACGGAGCACGTGCAGCTGCTGCAGGTGATCAAGAAGACGGAGACGGACATGAGCCTGCACCCGCTGCTGCAGGAGATCTACAAGGACCTGTACTAG

Related Sequences

XP_004875175.1 Protein

Pparg PREDICTED: peroxisome proliferator-activated receptor gamma isoform X6 [Heterocephalus glaber]

Length: 475 aa      View alignments
>XP_004875175.1
MVDTEMPFWPTNFGISSMDLSAMDDHSHAFDIKPFTTVDFSSISAPHYEDIPFPRMDPMVADYKYDLKFQEYQSTIKVEPSSPPYYSEKSQLYNRLPEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLTPECADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVGLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY