Details from NCBI annotation

Gene Symbol Popdc3
Gene Name popeye domain containing 3
Entrez Gene ID 101720696

Database interlinks

Part of NW_004624952.1 (Scaffold)

For more information consult the page for NW_004624952.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

POPDC3 ENSCPOG00000006187 (Guinea pig)

Gene Details

popeye domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005579, Guinea pig)

Protein Percentage 94.16%
CDS Percentage 91.52%
Ka/Ks Ratio 0.12525 (Ka = 0.0317, Ks = 0.2531)

POPDC3 ENSG00000132429 (Human)

Gene Details

popeye domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000254765, Human)

Protein Percentage 95.53%
CDS Percentage 93.01%
Ka/Ks Ratio 0.09186 (Ka = 0.0216, Ks = 0.2354)

Popdc3 ENSMUSG00000019848 (Mouse)

Gene Details

popeye domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000019994, Mouse)

Protein Percentage 90.38%
CDS Percentage 86.48%
Ka/Ks Ratio 0.10853 (Ka = 0.0519, Ks = 0.478)

Popdc3 ENSRNOG00000047102 (Rat)

Gene Details

popeye domain containing 3 (Popdc3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066864, Rat)

Protein Percentage 89.5%
CDS Percentage 85.99%
Ka/Ks Ratio 0.11053 (Ka = 0.0553, Ks = 0.5003)

Genome Location

Sequence Coding sequence

Length: 900 bp    Location: 403889..381543   Strand: -
>XM_004875076.1
ATGAAACCAGACAGTAGTACAGCCATGGAAAAGAATTCAAGTTTATGGAAGAACCTAATAGATGAGCACCCAGTCTGTACAACCTGGAAGCCAGAGGCCGAAGGAGCCATTTATCATCTTGCCAGTATTTTATTTGTAGTAGGTTTCATGGGTGGCAGTGGATTCTTCGGGCTCCTTTATGTCTTCAGTCTTCTGGGGCTGGGTTTTCTCTGCTCTGCAGTGTGGGCATGGGTAGATGTCTGTGCTGCTGACATATTTTCCTGGAATTTTGTACTGTTTGTCATCTGCTTCATGCAATTTGTTCATATTGCATATCAAGTTCGCAGCATAACTTTTGCCCGAGAATTCCAGGTGCTGTACAGCTCCCTTTTCCAGCCCCTGGGGATCTCTTTGCCTGTCTTCAGAACAATTGCTTTGAGCTCTGAAGTGGTTACTCTGGAAAAGGAGCACTGTTATGCCATGCAGGGGAAAACCTCCATTGATAAACTCTCCCTGCTTGTCTCAGGAAGGATCAGAGTGACAGTTGATGGTGAATTTCTGCACTACATTTTCCCCTTTCAATTTCTGGATTCTCCTGAGTGGGATTCACTGAGACCCACAGAAGAAGGCATTTTTCAGGTAACCCTCACAGCAGAAACTGATTGCCGATACGTGTCTTGGAGGAGAAAGAAATTATATTTGCTTTTTGCTCAGCACCGTTACATCTCCCGCCTGTTTTCAGTTTTAATTGGCAGTGACATAGCAGATAAACTGTATGCCTTGAATGACAGGGTATACATTGGGAAAAAATACCACTACGACATTCGGTTACCCAACTATTATCATATGTCAAGTCCAGAAGTGCCCAGATCACCCCTGACAGAACCATTTCAGAATTCCAAGCGATACTGTAATAAATGA

Related Sequences

XP_004875133.1 Protein

Popdc3 PREDICTED: popeye domain-containing protein 3 [Heterocephalus glaber]

Length: 299 aa      View alignments
>XP_004875133.1
MKPDSSTAMEKNSSLWKNLIDEHPVCTTWKPEAEGAIYHLASILFVVGFMGGSGFFGLLYVFSLLGLGFLCSAVWAWVDVCAADIFSWNFVLFVICFMQFVHIAYQVRSITFAREFQVLYSSLFQPLGISLPVFRTIALSSEVVTLEKEHCYAMQGKTSIDKLSLLVSGRIRVTVDGEFLHYIFPFQFLDSPEWDSLRPTEEGIFQVTLTAETDCRYVSWRRKKLYLLFAQHRYISRLFSVLIGSDIADKLYALNDRVYIGKKYHYDIRLPNYYHMSSPEVPRSPLTEPFQNSKRYCNK