Details from NCBI annotation

Gene Symbol Nup107
Gene Name nucleoporin 107kDa
Entrez Gene ID 101699022

Database interlinks

Part of NW_004624948.1 (Scaffold)

For more information consult the page for NW_004624948.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NUP107 ENSCPOG00000008635 (Guinea pig)

Gene Details

nucleoporin 107kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007757, Guinea pig)

Protein Percentage 88.71%
CDS Percentage 89.58%
Ka/Ks Ratio 0.27707 (Ka = 0.0741, Ks = 0.2674)

NUP107 ENSG00000111581 (Human)

Gene Details

nucleoporin 107kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000229179, Human)

Protein Percentage 80.86%
CDS Percentage 84.58%
Ka/Ks Ratio 0.27188 (Ka = 0.1156, Ks = 0.4251)

Nup107 ENSMUSG00000052798 (Mouse)

Gene Details

nucleoporin 107

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000063590, Mouse)

Protein Percentage 80.0%
CDS Percentage 79.57%
Ka/Ks Ratio 0.15892 (Ka = 0.1248, Ks = 0.7853)

Nup107 ENSRNOG00000006541 (Rat)

Gene Details

nucleoporin 107 (Nup107), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009203, Rat)

Protein Percentage 80.76%
CDS Percentage 79.93%
Ka/Ks Ratio 0.15119 (Ka = 0.1191, Ks = 0.7875)

Genome Location

Sequence Coding sequence

Length: 2832 bp    Location: 604186..555948   Strand: -
>XM_004875046.1
ATGGACAGGAGTGGCTTTGGAGAGATGTTATCCCCTGTAATCCGAGAGCCAGAGGTGACACGGACTGCACGGAAGCAGAGTGCTCAAAAAAGAGTTTTAATTCGAGCCTCCCATGATGAAAATGTTGGGAATTCTACACCAAGAAACCAGATGATTCCTCGAACTCCCAGCTCATTTCGACAGCCTTTTACTCCTCCAAACCGAAGCTTACCAAAATATCCAGATGTTTCCTGCATTTTGGGAACAGAAGAGAGGTCTCCTCAGCTCACACAGTCTTCAGGATTTTTGGGAAATATGTCCATGATAACGAATCTGGACGACAGTAACTGGGCAGCTGCATTTGCAACACGGCATTTAGGACTCTTCACGAAAACAGAGCCCAACAACCTCACAGAGGATGCAAATGTCAGCGCAGTTATGTTACGTGAAGATGATCCGGGAGAAGCTGCATCCTCAAGCATGTTTCCTGATTTCCTGCAGTCTTTTTTAAAGCATTCTTTATCTACAGTTTTTGACCTTGTGGAAGAATACGAAAATATTTGTAGCAATCAGGTAAGCAAATTTTACTTCATTGGTCAGTCTTCAGTACTTCTTGGTTTTGAACAGCATCAACTTGTTCTTTTCCATACTGTGCTTAAGGGAGACATAGAATGTAGGTTTACACATGTAGTAGATTACAAGGTGAGCTCATGCATTCAAATAAGGCTTTTTCATTTTGTGTTATGTTTCCTCAGAGACAGGATACAGACTTCATTACAAAATGGAAATATGCTTACAACTCCTCCTGTTAATGCCAGTGAAAAAACATTTGTGGAAGCATTGTTTCAGAGAGAGTCCCTTGTCCGACAGTGTCAGATGGTGGTAGATTGGTTAGAGAGTATTGCCAAAGAAGAAATTGGGGATTTTTCTGATAATATTGAATTTTATGCAAAATCAGTGTATTGGGAAAATACCCTCCATATTTTAAGACAACGGCAGCTAGCTTCTTCCATAGGCAGTGCCCGTCCTCTTGTCACTGAATTGGATCCTGATGCACCCATAAGACAGAAAATGCCCCTTGATGATCTGGATAGAGAAGATGAAGTTCGATTACTTAAATATCTCTTCACTCTAATCCGTGCTGGAATGACAGATGAGGCACAGCGACTCTGTAAACGTTGTGGTCAAGCATGGAGAGCTGCAACACTGGAAGGCTGGAAACTATACCATGACCCTAATATTAATGGAGGAGCAGAATTAGAACCTGTTGAAGGGAATCCGTATCGACGCATTTGGAAAATTAGTTGCTGGAGAATGGCAGAAGATGAACGTTTTAATAAATATGAGAGAGCAATTTATGCAGCTTTAAGTGGGAATCTCAAGCAGCTGCTTCCTGTCTGTGACACCTGGGAAGATACTGTATGGGCCTACTTCCGGGTGATGGTGGACAGTCTGGTAGAGCAGGAGATCCGGCTGTCAGTAATGGCCCAGAATGAAACTGAAGAACTCCCTAGAGAATACCTCGAAGCAAATTGGACCTTAGAAAAGGTTTTTGAAGAACTTCAAGCTACTGATAAAGAGAGAGTTCTGGAAGAGAATCAAGAACATTATCATATAGTTCAAAAATTCCTTATCCTGGGAAACATTGATGGTTTGATGGATGAGTTCAGCAGATGGCTTTCTAAAAGCAGAAGCAAACTACCTGGGCATCTCCTCCGCTTCATGACTCACCTCATTTTGTTTTTCCACACCCTGGGAATACAAGCCAAAGAAGAAGTTTCAATTGAAGTTTTAAAGACATACATACAGTTTTTAATAAGTGAGGGGAATACACATCTCATAGCATTTTATTGCTGTCATTTGCCTCAAGACCTTGCTGTTGCTCAGTATGCCTTATTTTTGGAAGGTGTCACAGATTTTGAACATCGCCACATTTCCTTGGAACTGGCTAGGGAAGCAGATTTGGATGTTGCAACAATAACAAAAACTGTGGTTGAGAATATTCGAAAGAAAGATAATGGTGAATTTAGTCCTCATGACCTGAGCCCAGACCAAGAGAGTGACATTACTCAGGAGGACCGTGTGAAAATTGATGTCATAGACTGGTTGTTATTTGACCCGACACAGAGGTCAGAAGCCCTGAAACAAAGCAATGCAATAATGAGAAAATTCCTAGCATTAAAAAAGCATGAAGCTGCTAAAGAAGTATTTGTGAAAATTCCTCGGGATTCTATCGCAGAAATCTATAATCTGTGGGAAGAAAGAGGAACCCACAATTCACTTCCTGCAGAAATTGATAATGCTGTCAGAGAACATTTGTGCATTAGAGCTTATTTGGAAGCCCATGAAACCTTTGCTGAGTGGTTTAACCATATGAATGCAGCTCCACAAAAACCTACTTTGATATCTCAGCCAAGTTTTACTGAGCAAGTAGCTTATGAACATAAAGAAAAGAAATATGAAATGGATTATGATATTTGGAAAGGACATCTGGATGCCCTAACTGCTGATGTCAAGGAGAAAATGTACAATGTCTTGTTGTTTGTTGATGGAGGATGGATGGTAGATGTCAGAGAGGATTCTGAAGGAGACCATGAAAGGACACATCAAATGGTTTTATTAAGAAAGCTTTGTCTGCCAAGACTGTGTTTTCTGCTTCACACCATACTGCATACGACGGGTCAGTACCAGGAGTGCCTGCAGTTGGCAGATATGGTGTCCTCCGAGCGCCATAAGCTCTACCTGGTATTTTCTAAGCAAGAACTAAAGAAATTGCTGCAGAAGTTAAGGGAATCCTCTCTCATGCTTCTGGACCAGGGACTTGACCCATTAGGATATGAAATCCAGTCGTAA

Related Sequences

XP_004875103.1 Protein

Nup107 PREDICTED: nuclear pore complex protein Nup107 [Heterocephalus glaber]

Length: 943 aa      View alignments
>XP_004875103.1
MDRSGFGEMLSPVIREPEVTRTARKQSAQKRVLIRASHDENVGNSTPRNQMIPRTPSSFRQPFTPPNRSLPKYPDVSCILGTEERSPQLTQSSGFLGNMSMITNLDDSNWAAAFATRHLGLFTKTEPNNLTEDANVSAVMLREDDPGEAASSSMFPDFLQSFLKHSLSTVFDLVEEYENICSNQVSKFYFIGQSSVLLGFEQHQLVLFHTVLKGDIECRFTHVVDYKVSSCIQIRLFHFVLCFLRDRIQTSLQNGNMLTTPPVNASEKTFVEALFQRESLVRQCQMVVDWLESIAKEEIGDFSDNIEFYAKSVYWENTLHILRQRQLASSIGSARPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTDEAQRLCKRCGQAWRAATLEGWKLYHDPNINGGAELEPVEGNPYRRIWKISCWRMAEDERFNKYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRLSVMAQNETEELPREYLEANWTLEKVFEELQATDKERVLEENQEHYHIVQKFLILGNIDGLMDEFSRWLSKSRSKLPGHLLRFMTHLILFFHTLGIQAKEEVSIEVLKTYIQFLISEGNTHLIAFYCCHLPQDLAVAQYALFLEGVTDFEHRHISLELAREADLDVATITKTVVENIRKKDNGEFSPHDLSPDQESDITQEDRVKIDVIDWLLFDPTQRSEALKQSNAIMRKFLALKKHEAAKEVFVKIPRDSIAEIYNLWEERGTHNSLPAEIDNAVREHLCIRAYLEAHETFAEWFNHMNAAPQKPTLISQPSFTEQVAYEHKEKKYEMDYDIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDSEGDHERTHQMVLLRKLCLPRLCFLLHTILHTTGQYQECLQLADMVSSERHKLYLVFSKQELKKLLQKLRESSLMLLDQGLDPLGYEIQS