Details from NCBI annotation

Gene Symbol Atp6ap1
Gene Name ATPase, H+ transporting, lysosomal accessory protein 1, transcript variant X1
Entrez Gene ID 101705200

Database interlinks

Part of NW_004624946.1 (Scaffold)

For more information consult the page for NW_004624946.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATP6AP1 ENSCPOG00000005972 (Guinea pig)

Gene Details

ATPase, H+ transporting, lysosomal accessory protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005390, Guinea pig)

Protein Percentage 87.42%
CDS Percentage 88.49%
Ka/Ks Ratio 0.1523 (Ka = 0.0673, Ks = 0.4417)

ATP6AP1 ENSG00000071553 (Human)

Gene Details

ATPase, H+ transporting, lysosomal accessory protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000358777, Human)

Protein Percentage 85.71%
CDS Percentage 85.15%
Ka/Ks Ratio 0.11939 (Ka = 0.0772, Ks = 0.6467)

Atp6ap1 ENSMUSG00000019087 (Mouse)

Gene Details

ATPase, H+ transporting, lysosomal accessory protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000019231, Mouse)

Protein Percentage 84.45%
CDS Percentage 82.22%
Ka/Ks Ratio 0.12905 (Ka = 0.096, Ks = 0.7438)

Atp6ap1 ENSRNOG00000037244 (Rat)

Gene Details

ATPase, H+ transporting, lysosomal accessory protein 1 (Atp6ap1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000053134, Rat)

Protein Percentage 84.23%
CDS Percentage 81.79%
Ka/Ks Ratio 0.12325 (Ka = 0.0958, Ks = 0.7776)

Genome Location

Sequence Coding sequence

Length: 1410 bp    Location: 885436..902078   Strand: +
>XM_004875001.1
ATGATGGCGGTCACTATGGCGGTTCGGGTTCGGACCGGGAAGCAGCGGGCTCCGGCCCCCTGGCGCATGCCAAGGCCGTTGTTGCTGCTGGCGGCGGCGGCGGTGGCAGCTGCGGCCTCGGAGCAGCAGGTGCCACTGGTGCTGTGGTCGAGTGACCGGAATCTTTGGGCTCCTGCGGCCGATACTCACGAGGGCCACATCACCAGCGACATGCAGCTTTCAACCTACTTAGACCCCGCCCTGGAACTGGGTCCCCGGAATGTGCTGCTCTTCCTGCAGGACAAGCTCAGCATTGAGGACTTCACAGCGTATGGTGGTGTGTTTGGAAATAAGCAGGACAGCGCCTTTTCTAACCTGGAGAATGCCCTGGACCTGGCCCCCTCCTCATTGGTGCTGCCTGCAGTCGACTGGTATGCAGTCAGCTCCCTGACCTCCTACCTGCAGGAGAAGCTAGGTGCCAGCCCTCTGCATGTGGACCTGGCCACCCTGCGGGAGCTGAAACTAAATGCCAGCTTCCCCGCCCTGCTGCTCATCCGCCTGCCCTACACAGCCAGCTCCGGTCTCATGGCGCCCAGGGAGGTCCTCACAGGCAATGATGAGGTGATTGGGCAGGTGCTGAGCACCCTCAAGTCTGAAGACATCCCTTACACGGCTGCGCTCACAGCGGTCCGCCCCTCCCGGGTGACTCGAGACATAGCCATGGTGACTGGGGGGCTAGGTCGCCAGCTGCTCCAAAAACAGGCAGCATTACCTGTGACCCATCCCCCGGTGAGTTACAATGACACTGCCCCGAGGATCCTGTTCTGGGCCCAGACTTTCTCTGTGGAGTACAGAGGGCATCTGGAAGACCTGACCTCCCGCACCTTCCAGTCGCAGGAGCTCAACCTCACTGGCTCCTTCTGGAATAACTCCCTGGCTGGACTGTCGCTGACCTACAATGGGCTCTTTGATGCCACAGTGACGTTCAAGTTCATCCTGGAAAACCGCTTGTACCCGGTGTCTGCCCGCTACTGGTTCACCATGGAGCGCCTGGAGATCCACAGCAATGGCTCCATCATCACCTTCAACGCCTCCCAGGTCACAGGGCCCAGCATCTACTCCTTCCACTGCGAGTACGTGAGCAGCAACAGCAACATGGGCAACCTCCTGGTGCCCCGCACAAAGCCCTCTCTGTGGCAGGTCACTCTCCAGGACTTCCAGATCCAGGCCTTCAATGTGACAGGCAAGCAGTTCTCCTATGCCAGCGACTGCGCGAGCTTCTTCTCCCCAGGCATCTGGATGGGGCTGCTCACGTCCCTCTTCATGCTTTTCATCTTCACCTATGGGCTGCACATGATCCTCAGCCTCAAGACCATGGATCGCTTTGATGACCACAAGGGCCCCACCATCGCTTTGACCCAGATTGTGTGA

Related Sequences

XP_004875058.1 Protein

Atp6ap1 PREDICTED: V-type proton ATPase subunit S1 isoform X1 [Heterocephalus glaber]

Length: 469 aa      View alignments
>XP_004875058.1
MMAVTMAVRVRTGKQRAPAPWRMPRPLLLLAAAAVAAAASEQQVPLVLWSSDRNLWAPAADTHEGHITSDMQLSTYLDPALELGPRNVLLFLQDKLSIEDFTAYGGVFGNKQDSAFSNLENALDLAPSSLVLPAVDWYAVSSLTSYLQEKLGASPLHVDLATLRELKLNASFPALLLIRLPYTASSGLMAPREVLTGNDEVIGQVLSTLKSEDIPYTAALTAVRPSRVTRDIAMVTGGLGRQLLQKQAALPVTHPPVSYNDTAPRILFWAQTFSVEYRGHLEDLTSRTFQSQELNLTGSFWNNSLAGLSLTYNGLFDATVTFKFILENRLYPVSARYWFTMERLEIHSNGSIITFNASQVTGPSIYSFHCEYVSSNSNMGNLLVPRTKPSLWQVTLQDFQIQAFNVTGKQFSYASDCASFFSPGIWMGLLTSLFMLFIFTYGLHMILSLKTMDRFDDHKGPTIALTQIV