Details from NCBI annotation

Gene Symbol Abcd1
Gene Name ATP-binding cassette, sub-family D (ALD), member 1
Entrez Gene ID 101720585

Database interlinks

Part of NW_004624946.1 (Scaffold)

For more information consult the page for NW_004624946.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ABCD1 ENSCPOG00000011702 (Guinea pig)

Gene Details

ATP-binding cassette, sub-family D (ALD), member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010525, Guinea pig)

Protein Percentage 94.51%
CDS Percentage 90.49%
Ka/Ks Ratio 0.03547 (Ka = 0.0242, Ks = 0.6837)

ABCD1 ENSG00000101986 (Human)

Gene Details

ATP-binding cassette, sub-family D (ALD), member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000218104, Human)

Protein Percentage 90.14%
CDS Percentage 86.58%
Ka/Ks Ratio 0.04483 (Ka = 0.0469, Ks = 1.0467)

Abcd1 ENSMUSG00000031378 (Mouse)

Gene Details

ATP-binding cassette, sub-family D (ALD), member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002084, Mouse)

Protein Percentage 90.96%
CDS Percentage 83.38%
Ka/Ks Ratio 0.03652 (Ka = 0.0447, Ks = 1.2251)

Abcd1 ENSRNOG00000018857 (Rat)

Gene Details

ATP-binding cassette, subfamily D (ALD), member 1 (Abcd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025863, Rat)

Protein Percentage 90.82%
CDS Percentage 83.29%
Ka/Ks Ratio 0.03846 (Ka = 0.0461, Ks = 1.1973)

Genome Location

Sequence Coding sequence

Length: 2193 bp    Location: 421138..439960   Strand: +
>XM_004874948.1
ATGCCGGTGCTCTCCACCCCACGGCCCTCGCGGGTGACCACACTGAGGCGCACAGCTGTGGTCTTGGCGCTGACAGCCTATGGAGCCCACAAACTCTACCCTCTGGTGCGCCAGTGCATGACCCCGGCCAGAGGTCCTCAGGGCCCAGCCGGGGAGTCCCTACAGGAGGCCCCCGAGCCCACTGCGACCAAGGCTGGCATGAACAGGGTGTTCCTGAGGCGGTTCCTGGTACTCTTGCGGCTGCTGTTCCCCCAGGTCCTGTGCCGGGAGACCGGGCTGCTGGCACTGCACTCTGCCGCGCTGGTGAGCCGGACCTTCCTCTCCGTCTATGTTGCCCGCCTGGATGGCCGGCTGGCCCGTTGCATCGTACGCAAGGACCCTCGAGCCTTCGGCTGGCAGCTTGTGCAGTGGCTGCTCATTGCACTCCCCGCCACCTTCGTTAACAGCGCCATCCGCTACCTGGAGGGCCAGCTGGCTCTGTCCTTCCGCAGCCGTCTGGTGACCCATGCCTACAGTCTCTACTTCTCCCAGCAGACCTACTACCGCGTGAGCAATATGGATGGACGGCTTCGCAACCCTGACCAGTCTCTGACTGAGGACCTGGTTGCCTTTACCGCCTCCGTGGCCCACCTCTACTCCAACCTGACCAAGCCGCTGCTGGACGTGGCCGTGACCTCCTACACTCTCATCAGGGCAGCGCGCTCCCGCGGGGCTGGCACAGCCTGGCCCTCGGCCATAGCAGGCCTTGTGGTGTTCCTCACGGCCAACGTGCTGCGGGCCTTCTCACCCAAGTTCGGGGAGCTGGTGGCCGAGGAGGCGCGACGTAAGGGGGAGCTGCGCTACATGCACTCTCGAGTGGTGGCTAACTCAGAGGAGATCGCCTTCTATGGGGGCCACAAGGTGGAGCTGGCACTGCTGCAGGACTGCTACCGGGCCCTGGCGGCGCAGATCAATGTCATCCTGCTGGAGCGCCTGTGGTATGTCATGCTCGAGCAGTTCCTCATGAAGTACGTGTGGAGTGCCTCGGGCCTGCTCATGGTGGCCGTCCCCATCATCACTGCCACTGGTTACTCGGAGTCAGACTCGGAAGCAGAGAAGAGGGCCGCCTTGGAGATGCGGGAGGAGGAGCTGGTGAGCGAGCGCACGGAGGCCTTCACCATCGCACGCAACCTGCTCACGGCCGCAGCTGATGCCACGGAGCGCATCATGTCATCCTACAAGGAGGTGACGGAGCTGGCCGGCTACACAGCACGCGTGCATGAGATGTTTCAGGTGTTCGAAGACGTCCAGCACTGTCACTTCAAGCGGCCAGGGGAGCCGGAGGACGCCCAGACGGGGGCAGGGGCCGTGGTGCGCTCTGGCGTCCATCTGGAGGGGCCCCTGCGCATCCGAGGCCAGGTGGTGGACGTGGAGCAGGATATCATCTGCGAGAACATCCCCATCATCACACCCACGGGAGAGGTGGTGGTGTCCAGCCTCAACATCCGGGTGGAAGAGGGCATGCACCTGCTCATCACAGGCCCCAACGGCTGCGGCAAGAGCTCGCTCTTCCGGATCCTGGGCGGGCTGTGGCCCACTTACGGTGGCGTTCTCTACAAGCCCCCTCCACAGCGCATGTTCTACATCCCCCAGAGGCCCTACATGTCTGTGGGCTCATTGCGAGACCAGGTCATCTACCCGGACTCAGTGGAGGACATGCGCCGCAAGGGTTACTCGGAGCAGCAGCTGGAGACCATCCTGGACATCGTGCACCTGCACCACATCCTGCAGCGGGAGGGAGGCTGGGAGGCCCTGTGTGACTGGAAGGATGTGCTGTCTGGGGGTGAGAAGCAGCGGATTGGCATGGCTCGCATGTTCTACCACAGGCCCAAGTACGCCCTGCTGGACGAGTGCACCAGCGCCGTGAGCATCGACGTGGAGGGCAAGATCTTCCAGGCGGCCAAGGACGCGGGCATCGCTCTGCTGTCCATCACTCACCGGCCCTCACTGTGGAAGTACCACACGCACCTGCTGCAGTTCGACGGCGAGGGTGGCTGGAAGTTGGAGAAGCTGGACTCGGCGGCCAGGCTGAGCCTCACCGAGGAGCGGCAGCGGCTAGAGCAGCAGCTGGCCGGCGTCCCCAAGATGCAGCAGCGCCTGCAGGAGCTGCGCCACATCCTTGGCGAGGCCCCTGGCCCTGGTGTCTCCATCTGA

Related Sequences

XP_004875005.1 Protein

Abcd1 PREDICTED: ATP-binding cassette sub-family D member 1 [Heterocephalus glaber]

Length: 730 aa      View alignments
>XP_004875005.1
MPVLSTPRPSRVTTLRRTAVVLALTAYGAHKLYPLVRQCMTPARGPQGPAGESLQEAPEPTATKAGMNRVFLRRFLVLLRLLFPQVLCRETGLLALHSAALVSRTFLSVYVARLDGRLARCIVRKDPRAFGWQLVQWLLIALPATFVNSAIRYLEGQLALSFRSRLVTHAYSLYFSQQTYYRVSNMDGRLRNPDQSLTEDLVAFTASVAHLYSNLTKPLLDVAVTSYTLIRAARSRGAGTAWPSAIAGLVVFLTANVLRAFSPKFGELVAEEARRKGELRYMHSRVVANSEEIAFYGGHKVELALLQDCYRALAAQINVILLERLWYVMLEQFLMKYVWSASGLLMVAVPIITATGYSESDSEAEKRAALEMREEELVSERTEAFTIARNLLTAAADATERIMSSYKEVTELAGYTARVHEMFQVFEDVQHCHFKRPGEPEDAQTGAGAVVRSGVHLEGPLRIRGQVVDVEQDIICENIPIITPTGEVVVSSLNIRVEEGMHLLITGPNGCGKSSLFRILGGLWPTYGGVLYKPPPQRMFYIPQRPYMSVGSLRDQVIYPDSVEDMRRKGYSEQQLETILDIVHLHHILQREGGWEALCDWKDVLSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHTHLLQFDGEGGWKLEKLDSAARLSLTEERQRLEQQLAGVPKMQQRLQELRHILGEAPGPGVSI